RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 DTNBP1Q96EV8 351 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 SGSM3Q96HU1 749 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 PGBD1Q96JS3 809 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 KLHL14Q9P2G3 628 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 FYB1O15117 783 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 DNAJC8O75937 253 aaPredicted RBP11.4□□□□□ -0.58
CD28-202ENST00000374481 FLOT1O75955 427 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 PTH1RQ03431 593 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 LRRN4CLQ8ND94 238 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 NAP1L3Q99457 506 aaPredicted RBP11.4□□□□□ -0.58
CD28-202ENST00000374481 OSBPL1AQ9BXW6 950 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 HYOU1Q9Y4L1 999 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 OPHN1O60890 802 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 KRT18P05783 430 aaKnown RBP11.4□□□□□ -0.58
CD28-202ENST00000374481 TBC1D8BQ0IIM8 1120 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 TMED1Q13445 227 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 MCMDC2Q4G0Z9 681 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 PHLDB3Q6NSJ2 640 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 GBP7Q8N8V2 638 aaPredicted RBP11.4□□□□□ -0.58
CD28-202ENST00000374481 NSMCE1Q8WV22 266 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 FTOQ9C0B1 505 aaKnown RBP eCLIP11.4□□□□□ -0.58
CD28-202ENST00000374481 ZHX3Q9H4I2 956 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 KCNG1Q9UIX4 513 aa11.4□□□□□ -0.58
CD28-202ENST00000374481 DISP1Q96F81 1524 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 DIAPH2O60879 1101 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 CMA1P23946 247 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 SEPT2Q15019 361 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 CCDC92Q53HC0 331 aaPredicted RBP11.39□□□□□ -0.59
CD28-202ENST00000374481 MYSM1Q5VVJ2 828 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 TAOK1Q7L7X3 1001 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 NCOA7Q8NI08 942 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 NOX5Q96PH1 765 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 CCDC77Q9BR77 488 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 CTNND2Q9UQB3 1225 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 KDM5CP41229 1560 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 HMGB1P1B2RPK0 211 aaPredicted RBP11.39□□□□□ -0.59
CD28-202ENST00000374481 SKIP12755 728 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 MAGEA1P43355 309 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 ZNF131P52739 623 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 SMTNP53814 917 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 PHLDB2Q86SQ0 1253 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 RAB3IL1Q8TBN0 382 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 FAM227BQ96M60 508 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 FUCA2Q9BTY2 467 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 CDK19Q9BWU1 502 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 PNMA6EA0A0J9YXQ4 647 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 GPTP24298 496 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 PSMC4P43686 418 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 C2orf54Q08AI8 447 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 MAP7D1Q3KQU3 841 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 CCDC25Q86WR0 208 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 UNC5CLQ8IV45 518 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 PHACTR3Q96KR7 559 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 TSG101Q99816 390 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 TRIM31Q9BZY9 425 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 ABCF2Q9UG63 623 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 L1RE1Q9UN81 338 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 EVI5O60447 810 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 PPP1R37O75864 691 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 SUN1O94901 812 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 KRT13P13646 458 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 ZNF827Q17R98 1081 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 CYB5D1Q6P9G0 228 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 CROCCP2Q86T23 111 aa11.39□□□□□ -0.59
CD28-202ENST00000374481 DHX40Q8IX18 779 aaKnown RBP11.39□□□□□ -0.59
CD28-202ENST00000374481 IRX2Q9BZI1 471 aaPredicted RBP11.39□□□□□ -0.59
CD28-202ENST00000374481 LSG1Q9H089 658 aaKnown RBP11.39□□□□□ -0.59
CD28-202ENST00000374481 FAF1Q9UNN5 650 aaPredicted RBP11.39□□□□□ -0.59
CD28-202ENST00000374481 TARBP1Q13395 1621 aaKnown RBP11.39□□□□□ -0.59
CD28-202ENST00000374481 GMNCA6NCL1 334 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 RGS16O15492 202 aaPredicted RBP11.38□□□□□ -0.59
CD28-202ENST00000374481 RBL2Q08999 1139 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 SOGA3Q5TF21 947 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 VPS52Q8N1B4 723 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 P3H4Q92791 437 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 PCDHA5Q9Y5H7 936 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 ARHGAP5Q13017 1502 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 USP14P54578 494 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 CTNNBL1Q8WYA6 563 aaPredicted RBP11.38□□□□□ -0.59
CD28-202ENST00000374481 KIF24Q5T7B8 1368 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 GUCY1A3Q02108 690 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 MGARPQ8TDB4 240 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 KCNV2Q8TDN2 545 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 HAUS1Q96CS2 278 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 CCT8L2Q96SF2 557 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 IFIH1Q9BYX4 1025 aaKnown RBP11.38□□□□□ -0.59
CD28-202ENST00000374481 PLCB1Q9NQ66 1216 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 BMP2KQ9NSY1 1161 aaPredicted RBP11.38□□□□□ -0.59
CD28-202ENST00000374481 TSKSQ9UJT2 592 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 PAIP2BQ9ULR5 123 aaKnown RBP11.38□□□□□ -0.59
CD28-202ENST00000374481 ADGRF5Q8IZF2 1346 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 KDM5DQ9BY66 1539 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 FAM135AQ9P2D6 1515 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 TXNDC9O14530 226 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 HNRNPCP07910 306 aaKnown RBP eCLIP11.38□□□□□ -0.59
CD28-202ENST00000374481 IFNAR2P48551 515 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 ACBD5Q5T8D3 534 aaPredicted RBP11.38□□□□□ -0.59
CD28-202ENST00000374481 ZNF473Q8WTR7 871 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms