RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ENOX1Q8TC92 643 aaKnown RBP14.61□□□□□ -0.07
PRPF4-201ENST00000374198 NWD2Q9ULI1 1742 aa14.61□□□□□ -0.07
PRPF4-201ENST00000374198 ARHGAP25P42331 645 aa14.61□□□□□ -0.07
PRPF4-201ENST00000374198 MRPL12P52815 198 aaKnown RBP14.61□□□□□ -0.07
PRPF4-201ENST00000374198 CRYMQ14894 314 aa14.61□□□□□ -0.07
PRPF4-201ENST00000374198 IQCA1Q86XH1 822 aa14.61□□□□□ -0.07
PRPF4-201ENST00000374198 SELENOOQ9BVL4 669 aa14.61□□□□□ -0.07
PRPF4-201ENST00000374198 KLC4Q9NSK0 619 aa14.61□□□□□ -0.07
PRPF4-201ENST00000374198 LRRC37A3O60309 1634 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.6□□□□□ -0.07
PRPF4-201ENST00000374198 A0A1B0GTH6 734 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 FAM237AA0A1B0GTK4 181 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 GNAT3A8MTJ3 354 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 FMNL3Q8IVF7 1028 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 ACRBPQ8NEB7 543 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 CPLX3Q8WVH0 158 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 BABAM1Q9NWV8 329 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 CEMIPQ8WUJ3 1361 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 KIF28PB7ZC32 967 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 NDUFAB1O14561 156 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 LONRF3Q496Y0 759 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 CCDC102BQ68D86 513 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 PEAK1Q9H792 1746 aa14.6□□□□□ -0.07
PRPF4-201ENST00000374198 A0A0G2JS52 829 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 EIF2S2P20042 333 aaKnown RBP14.59□□□□□ -0.07
PRPF4-201ENST00000374198 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
PRPF4-201ENST00000374198 CPDO75976 1380 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 KDRP35968 1356 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 ZNF609O15014 1411 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 A6NNZ2 444 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 TEX33O43247 280 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 MFAP3LO75121 409 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 SMTNP53814 917 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 TUBB8Q3ZCM7 444 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 MCMDC2Q4G0Z9 681 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 GRIPAP1Q4V328 841 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 NAIF1Q69YI7 327 aaPredicted RBP14.59□□□□□ -0.07
PRPF4-201ENST00000374198 TTC19Q6DKK2 380 aaPredicted RBP14.59□□□□□ -0.07
PRPF4-201ENST00000374198 CCNI2Q6ZMN8 369 aaPredicted RBP14.59□□□□□ -0.07
PRPF4-201ENST00000374198 YTHDF3Q7Z739 585 aaKnown RBP14.59□□□□□ -0.07
PRPF4-201ENST00000374198 TRMT44Q8IYL2 757 aaKnown RBP14.59□□□□□ -0.07
PRPF4-201ENST00000374198 SAMSN1Q9NSI8 373 aaKnown RBP14.59□□□□□ -0.07
PRPF4-201ENST00000374198 SLIT3O75094 1523 aa14.59□□□□□ -0.07
PRPF4-201ENST00000374198 GOLGA8KD6RF30 607 aa14.58□□□□□ -0.07
PRPF4-201ENST00000374198 PPP6R2O75170 966 aa14.58□□□□□ -0.07
PRPF4-201ENST00000374198 IRX1P78414 480 aaPredicted RBP14.58□□□□□ -0.07
PRPF4-201ENST00000374198 RESP18Q5W5W9 173 aa14.58□□□□□ -0.07
PRPF4-201ENST00000374198 TRAPPC11Q7Z392 1133 aa14.58□□□□□ -0.07
PRPF4-201ENST00000374198 IL17REQ8NFR9 667 aa14.58□□□□□ -0.07
PRPF4-201ENST00000374198 NBPF3Q9H094 633 aa14.58□□□□□ -0.07
PRPF4-201ENST00000374198 SLC24A3Q9HC58 644 aa14.58□□□□□ -0.07
PRPF4-201ENST00000374198 MAN1B1Q9UKM7 699 aa14.58□□□□□ -0.07
PRPF4-201ENST00000374198 ZMYND10O75800 440 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 CHGBP05060 677 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 MYBL2P10244 700 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 SKOR1P84550 965 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 ATP2B2Q01814 1243 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 KIF23Q02241 960 aaPredicted RBP14.58□□□□□ -0.08
PRPF4-201ENST00000374198 TEFQ10587 303 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 SF3B2Q13435 895 aaKnown RBP14.58□□□□□ -0.08
PRPF4-201ENST00000374198 BIRC2Q13490 618 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 GSPT2Q8IYD1 628 aaKnown RBP14.58□□□□□ -0.08
PRPF4-201ENST00000374198 MLKLQ8NB16 471 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 CHPF2Q9P2E5 772 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 DACH1Q9UI36 760 aa14.58□□□□□ -0.08
PRPF4-201ENST00000374198 RASSF9O75901 435 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 NBPF14Q5TI25 921 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
PRPF4-201ENST00000374198 ANKRD18AQ8IVF6 992 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 MMS19Q96T76 1030 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 TRIM6Q9C030 488 aaPredicted RBP14.57□□□□□ -0.08
PRPF4-201ENST00000374198 USP31Q70CQ4 1352 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 FECHP22830 423 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 MDM2Q00987 491 aaPredicted RBP14.57□□□□□ -0.08
PRPF4-201ENST00000374198 CCDC40Q4G0X9 1142 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 CEP85LQ5SZL2 805 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 MICALCLQ6ZW33 695 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 MED15Q96RN5 788 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 VCPKMTQ9H867 229 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 GJB4Q9NTQ9 266 aa14.57□□□□□ -0.08
PRPF4-201ENST00000374198 KDM6AO15550 1401 aaPredicted RBP14.57□□□□□ -0.08
PRPF4-201ENST00000374198 FOXN1O15353 648 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 CHST3Q7LGC8 479 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 CCDC51Q96ER9 411 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 PAGR1Q9BTK6 254 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 RTN2O75298 545 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 CASP14P31944 242 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 PBX1P40424 430 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 ACTN3Q08043 901 aaPredicted RBP14.56□□□□□ -0.08
PRPF4-201ENST00000374198 PLCB4Q15147 1175 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 APTXQ7Z2E3 356 aaKnown RBP14.56□□□□□ -0.08
PRPF4-201ENST00000374198 TMTC1Q8IUR5 882 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 CNGA4Q8IV77 575 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 ANKRD24Q8TF21 1146 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 RPGRIP1Q96KN7 1286 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 KCNH3Q9ULD8 1083 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 WWC3Q9ULE0 1092 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 NRAPQ86VF7 1730 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 E7EWF7 191 aa14.56□□□□□ -0.08
PRPF4-201ENST00000374198 ECM2O94769 699 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms