RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 AGXT2Q9BYV1 514 aa17.25■□□□□ 0.35
SMPDL3B-201ENST00000373888 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMPDL3B-201ENST00000373888 TSPY2A6NKD2 308 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 ADM5C9JUS6 153 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 POTEIP0CG38 1075 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 POTEJP0CG39 1038 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 TFAP4Q01664 338 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 FAM47AQ5JRC9 791 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 SNX21Q969T3 373 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 CCDC17Q96LX7 622 aa17.24■□□□□ 0.35
SMPDL3B-201ENST00000373888 POLR2AP24928 1970 aaKnown RBP17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 MYH8P13535 1937 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 SSC5DA1L4H1 1573 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 TSPY3P0CV98 308 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 TSPY8P0CW00 308 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 AK2P54819 239 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 SUPT20HL1Q3ZLR7 823 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 Q6ZUG5 572 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 CDC37L1Q7L3B6 337 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 LDHDQ86WU2 507 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 IQCA1Q86XH1 822 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 NEDD1Q8NHV4 660 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 TCP11L1Q9NUJ3 509 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
SMPDL3B-201ENST00000373888 AKR1B1P15121 316 aa17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 MCM2P49736 904 aa17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 SART3Q15020 963 aaKnown RBP17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 ANKRD1Q15327 319 aa17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 CERKLQ49MI3 558 aaPredicted RBP17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 PRAMEF18Q5VWM3 479 aa17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 DCAF15Q66K64 600 aa17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 MIGA2Q7L4E1 593 aa17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 IGDCC4Q8TDY8 1250 aa17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 ZSCAN10Q96SZ4 725 aaPredicted RBP17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 LRRC2Q9BYS8 371 aa17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 GREB1LQ9C091 1923 aaPredicted RBP17.22■□□□□ 0.35
SMPDL3B-201ENST00000373888 SH2B2O14492 632 aaPredicted RBP17.21■□□□□ 0.35
SMPDL3B-201ENST00000373888 USP48Q86UV5 1035 aa17.21■□□□□ 0.35
SMPDL3B-201ENST00000373888 HSCBQ8IWL3 235 aa17.21■□□□□ 0.35
SMPDL3B-201ENST00000373888 UBAC1Q9BSL1 405 aa17.21■□□□□ 0.35
SMPDL3B-201ENST00000373888 IL17RBQ9NRM6 502 aa17.21■□□□□ 0.35
SMPDL3B-201ENST00000373888 ANGEL1Q9UNK9 670 aaKnown RBP17.21■□□□□ 0.35
SMPDL3B-201ENST00000373888 TNKSO95271 1327 aa17.21■□□□□ 0.35
SMPDL3B-201ENST00000373888 PHF20L1A8MW92 1017 aa17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 IFIT3O14879 490 aaKnown RBP17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 LIFRP42702 1097 aa17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 FGD1P98174 961 aa17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 RRP1BQ14684 758 aaKnown RBP17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 SEC23AQ15436 765 aa17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 CCDC178Q5BJE1 867 aa17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 TMEM67Q5HYA8 995 aa17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 ZKSCAN3Q9BRR0 538 aa17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 TBC1D2Q9BYX2 928 aa17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 GLIS2Q9BZE0 524 aaPredicted RBP17.21■□□□□ 0.34
SMPDL3B-201ENST00000373888 IGKV6D-41A0A0C4DH26 115 aa17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 ERICH2A1L162 156 aa17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 MAP1SQ66K74 1059 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 SGMS1Q86VZ5 419 aa17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 BRF1Q92994 677 aa17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 CDCA5Q96FF9 252 aa17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 ZNF341Q9BYN7 854 aa17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 LY9Q9HBG7 655 aa17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 ZNF112Q9UJU3 913 aa17.2■□□□□ 0.34
SMPDL3B-201ENST00000373888 NMT2O60551 498 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 NOVP48745 357 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 EVCP57679 992 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 WTAPQ15007 396 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 ABCB5Q2M3G0 1257 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 DLK2Q6UY11 383 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 TMEM179Q6ZVK1 233 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 DGKHQ86XP1 1220 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 TMTC2Q8N394 836 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 GPBP1L1Q9HC44 474 aaPredicted RBP17.19■□□□□ 0.34
SMPDL3B-201ENST00000373888 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
SMPDL3B-201ENST00000373888 GDF11O95390 407 aa17.18■□□□□ 0.34
SMPDL3B-201ENST00000373888 CAP2P40123 477 aa17.18■□□□□ 0.34
SMPDL3B-201ENST00000373888 RCSD1Q6JBY9 416 aa17.18■□□□□ 0.34
SMPDL3B-201ENST00000373888 CEP95Q96GE4 821 aa17.18■□□□□ 0.34
SMPDL3B-201ENST00000373888 CABP5Q9NP86 173 aa17.18■□□□□ 0.34
SMPDL3B-201ENST00000373888 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
SMPDL3B-201ENST00000373888 CTNND1O60716 968 aaKnown RBP17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 GUCY1A2P33402 732 aa17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 NF2P35240 595 aa17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 JAG1P78504 1218 aa17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 SHROOM1Q2M3G4 852 aaPredicted RBP17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 PPP4R3BQ5MIZ7 849 aa17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 KLRG1Q96E93 195 aa17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 SENP2Q9HC62 589 aa17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 GINM1Q9NU53 330 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms