RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 HTTP42858 3142 aa19.23■□□□□ 0.67
HDAC8-208ENST00000373583 POLR3DP05423 398 aaPredicted RBP19.22■□□□□ 0.67
HDAC8-208ENST00000373583 PLCD1P51178 756 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 JAG1P78504 1218 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 GABPAQ06546 454 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 SPP2Q13103 211 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 LRRFIP1Q32MZ4 808 aaKnown RBP19.22■□□□□ 0.67
HDAC8-208ENST00000373583 SH3D19Q5HYK7 790 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 FBXO46Q6PJ61 603 aaPredicted RBP19.22■□□□□ 0.67
HDAC8-208ENST00000373583 GADL1Q6ZQY3 521 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 OTOP1Q7RTM1 612 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 CD99L2Q8TCZ2 262 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 APPBP2Q92624 585 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 PUS7LQ9H0K6 701 aaKnown RBP19.22■□□□□ 0.67
HDAC8-208ENST00000373583 STAP2Q9UGK3 403 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 AGTPBP1Q9UPW5 1226 aa19.22■□□□□ 0.67
HDAC8-208ENST00000373583 RNF113AO15541 343 aaKnown RBP19.21■□□□□ 0.67
HDAC8-208ENST00000373583 GDF11O95390 407 aa19.21■□□□□ 0.67
HDAC8-208ENST00000373583 SHMT1P34896 483 aa19.21■□□□□ 0.67
HDAC8-208ENST00000373583 C17orf99Q6UX52 265 aa19.21■□□□□ 0.67
HDAC8-208ENST00000373583 TRIM17Q9Y577 477 aa19.21■□□□□ 0.67
HDAC8-208ENST00000373583 RBBP6Q7Z6E9 1792 aaKnown RBP19.21■□□□□ 0.67
HDAC8-208ENST00000373583 PRKAB2O43741 272 aa19.2■□□□□ 0.66
HDAC8-208ENST00000373583 ARHGEF6Q15052 776 aa19.2■□□□□ 0.66
HDAC8-208ENST00000373583 GREB1LQ9C091 1923 aaPredicted RBP19.19■□□□□ 0.66
HDAC8-208ENST00000373583 PDE1AP54750 535 aa19.19■□□□□ 0.66
HDAC8-208ENST00000373583 LACTBP83111 547 aaPredicted RBP19.19■□□□□ 0.66
HDAC8-208ENST00000373583 CAP1Q01518 475 aa19.19■□□□□ 0.66
HDAC8-208ENST00000373583 SHROOM1Q2M3G4 852 aaPredicted RBP19.19■□□□□ 0.66
HDAC8-208ENST00000373583 OSBP2Q969R2 916 aa19.19■□□□□ 0.66
HDAC8-208ENST00000373583 DDRGK1Q96HY6 314 aa19.19■□□□□ 0.66
HDAC8-208ENST00000373583 STRBPQ96SI9 672 aaKnown RBP19.19■□□□□ 0.66
HDAC8-208ENST00000373583 EFCC1Q9HA90 598 aa19.19■□□□□ 0.66
HDAC8-208ENST00000373583 SWAP70Q9UH65 585 aa19.19■□□□□ 0.66
HDAC8-208ENST00000373583 HPS5Q9UPZ3 1129 aa19.19■□□□□ 0.66
HDAC8-208ENST00000373583 SLC4A4Q9Y6R1 1079 aa19.19■□□□□ 0.66
HDAC8-208ENST00000373583 C19orf81C9J6K1 198 aa19.18■□□□□ 0.66
HDAC8-208ENST00000373583 GH2P01242 217 aa19.18■□□□□ 0.66
HDAC8-208ENST00000373583 IGHDP01880 384 aa19.18■□□□□ 0.66
HDAC8-208ENST00000373583 BCRP11274 1271 aa19.18■□□□□ 0.66
HDAC8-208ENST00000373583 HMGCS2P54868 508 aa19.18■□□□□ 0.66
HDAC8-208ENST00000373583 BACE1P56817 501 aa19.18■□□□□ 0.66
HDAC8-208ENST00000373583 MTMR2Q13614 643 aa19.18■□□□□ 0.66
HDAC8-208ENST00000373583 CERKLQ49MI3 558 aaPredicted RBP19.18■□□□□ 0.66
HDAC8-208ENST00000373583 AMOTL1Q8IY63 956 aa19.18■□□□□ 0.66
HDAC8-208ENST00000373583 PNMA3Q9UL41 463 aa19.18■□□□□ 0.66
HDAC8-208ENST00000373583 CCDC85CA6NKD9 419 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 GNRH1P01148 92 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 CYP2C8P10632 490 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 CYP2D6P10635 497 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 EVX2Q03828 476 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 PABPC4Q13310 644 aaKnown RBP eCLIP19.17■□□□□ 0.66
HDAC8-208ENST00000373583 KIF22Q14807 665 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 ABCB5Q2M3G0 1257 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 TREML2Q5T2D2 321 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 C12orf60Q5U649 245 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 GIMAP6Q6P9H5 292 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 FSD1Q9BTV5 496 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 LNPKQ9C0E8 428 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 ARPP21Q9UBL0 812 aaPredicted RBP19.17■□□□□ 0.66
HDAC8-208ENST00000373583 CPA4Q9UI42 421 aa19.17■□□□□ 0.66
HDAC8-208ENST00000373583 USP17L10C9JJH3 530 aa19.16■□□□□ 0.66
HDAC8-208ENST00000373583 GPAA1O43292 621 aa19.16■□□□□ 0.66
HDAC8-208ENST00000373583 GNAT2P19087 354 aa19.16■□□□□ 0.66
HDAC8-208ENST00000373583 NUCB1Q02818 461 aa19.16■□□□□ 0.66
HDAC8-208ENST00000373583 TICAM2Q86XR7 235 aa19.16■□□□□ 0.66
HDAC8-208ENST00000373583 PTPN22Q9Y2R2 807 aa19.16■□□□□ 0.66
HDAC8-208ENST00000373583 ROBO3Q96MS0 1386 aa19.16■□□□□ 0.66
HDAC8-208ENST00000373583 USP17L12C9JPN9 530 aa19.15■□□□□ 0.66
HDAC8-208ENST00000373583 USP17L21D6R901 530 aa19.15■□□□□ 0.66
HDAC8-208ENST00000373583 CHD1LQ86WJ1 897 aa19.15■□□□□ 0.66
HDAC8-208ENST00000373583 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
HDAC8-208ENST00000373583 EVI5LQ96CN4 794 aa19.15■□□□□ 0.66
HDAC8-208ENST00000373583 CABP5Q9NP86 173 aa19.15■□□□□ 0.66
HDAC8-208ENST00000373583 TMOD4Q9NZQ9 345 aa19.15■□□□□ 0.66
HDAC8-208ENST00000373583 GSG1L2A8MUP6 293 aa19.14■□□□□ 0.65
HDAC8-208ENST00000373583 M0R2C6 588 aa19.14■□□□□ 0.65
HDAC8-208ENST00000373583 SBK1Q52WX2 424 aa19.14■□□□□ 0.65
HDAC8-208ENST00000373583 ZMYM1Q5SVZ6 1142 aa19.14■□□□□ 0.65
HDAC8-208ENST00000373583 CTR9Q6PD62 1173 aa19.14■□□□□ 0.65
HDAC8-208ENST00000373583 C16orf86Q6ZW13 317 aa19.14■□□□□ 0.65
HDAC8-208ENST00000373583 C12orf42Q96LP6 360 aa19.14■□□□□ 0.65
HDAC8-208ENST00000373583 KIAA1683Q9H0B3 1180 aa19.14■□□□□ 0.65
HDAC8-208ENST00000373583 PARP14Q460N5 1801 aa19.14■□□□□ 0.65
HDAC8-208ENST00000373583 HOXA7P31268 230 aaPredicted RBP19.13■□□□□ 0.65
HDAC8-208ENST00000373583 GUCY1A2P33402 732 aa19.13■□□□□ 0.65
HDAC8-208ENST00000373583 PRMT2P55345 433 aa19.13■□□□□ 0.65
HDAC8-208ENST00000373583 RAB3GAP1Q15042 981 aa19.13■□□□□ 0.65
HDAC8-208ENST00000373583 TMEM179Q6ZVK1 233 aa19.13■□□□□ 0.65
HDAC8-208ENST00000373583 SLC44A5Q8NCS7 719 aa19.13■□□□□ 0.65
HDAC8-208ENST00000373583 DYNLL2Q96FJ2 89 aa19.13■□□□□ 0.65
HDAC8-208ENST00000373583 ARHGAP39Q9C0H5 1083 aa19.13■□□□□ 0.65
HDAC8-208ENST00000373583 ASCC2Q9H1I8 757 aaPredicted RBP19.13■□□□□ 0.65
HDAC8-208ENST00000373583 OSBPL3Q9H4L5 887 aa19.13■□□□□ 0.65
HDAC8-208ENST00000373583 CYP2D7A0A087X1C5 515 aa19.12■□□□□ 0.65
HDAC8-208ENST00000373583 OSBPP22059 807 aa19.12■□□□□ 0.65
HDAC8-208ENST00000373583 GCLCP48506 637 aaPredicted RBP19.12■□□□□ 0.65
HDAC8-208ENST00000373583 USP14P54578 494 aa19.12■□□□□ 0.65
HDAC8-208ENST00000373583 FAM110CQ1W6H9 321 aa19.12■□□□□ 0.65
HDAC8-208ENST00000373583 B4GALNT3Q6L9W6 998 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms