RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 SERPINB2P05120 415 aa15.08■□□□□ 0
NCDN-203ENST00000373253 CCT6AP40227 531 aaKnown RBP15.08■□□□□ 0
NCDN-203ENST00000373253 NAPAP54920 295 aa15.08■□□□□ 0
NCDN-203ENST00000373253 ILDR1Q86SU0 546 aaPredicted RBP15.08■□□□□ 0
NCDN-203ENST00000373253 KIAA0825Q8IV33 1275 aa15.08■□□□□ 0
NCDN-203ENST00000373253 SH3RF3Q8TEJ3 882 aaPredicted RBP15.08■□□□□ 0
NCDN-203ENST00000373253 NOC3LQ8WTT2 800 aaKnown RBP15.08■□□□□ 0
NCDN-203ENST00000373253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.08■□□□□ 0
NCDN-203ENST00000373253 FANCLQ9NW38 375 aa15.08■□□□□ 0
NCDN-203ENST00000373253 GGA1Q9UJY5 639 aa15.08■□□□□ 0
NCDN-203ENST00000373253 IDEP14735 1019 aa15.08■□□□□ 0
NCDN-203ENST00000373253 TXLNAP40222 546 aa15.08■□□□□ 0
NCDN-203ENST00000373253 SLC39A14Q15043 492 aa15.08■□□□□ 0
NCDN-203ENST00000373253 LRRC47Q8N1G4 583 aaKnown RBP15.08■□□□□ 0
NCDN-203ENST00000373253 IGSF3O75054 1194 aa15.07■□□□□ 0
NCDN-203ENST00000373253 CBX1P83916 185 aa15.07■□□□□ 0
NCDN-203ENST00000373253 ENOX2Q16206 610 aaKnown RBP15.07■□□□□ 0
NCDN-203ENST00000373253 SPTY2D1Q68D10 685 aaPredicted RBP15.07■□□□□ 0
NCDN-203ENST00000373253 AMIGO3Q86WK7 504 aa15.07■□□□□ 0
NCDN-203ENST00000373253 NARFQ9UHQ1 456 aa15.07■□□□□ 0
NCDN-203ENST00000373253 RPS6KA4O75676 772 aa15.07■□□□□ 0
NCDN-203ENST00000373253 YEATS4O95619 227 aa15.07■□□□□ 0
NCDN-203ENST00000373253 SLURP2P0DP57 97 aa15.07■□□□□ 0
NCDN-203ENST00000373253 UBA7P41226 1012 aa15.07■□□□□ 0
NCDN-203ENST00000373253 PNMA1Q8ND90 353 aa15.07■□□□□ 0
NCDN-203ENST00000373253 CSRNP2Q9H175 543 aa15.07■□□□□ 0
NCDN-203ENST00000373253 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.07■□□□□ 0
NCDN-203ENST00000373253 SEC63Q9UGP8 760 aaKnown RBP15.07■□□□□ 0
NCDN-203ENST00000373253 CEP131Q9UPN4 1083 aa15.07■□□□□ 0
NCDN-203ENST00000373253 APBA3O96018 575 aa15.06■□□□□ 0
NCDN-203ENST00000373253 KIF5BP33176 963 aa15.06■□□□□ 0
NCDN-203ENST00000373253 BTDP43251 543 aa15.06■□□□□ 0
NCDN-203ENST00000373253 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
NCDN-203ENST00000373253 HS1BP3Q53T59 392 aa15.06■□□□□ 0
NCDN-203ENST00000373253 RRAGBQ5VZM2 374 aa15.06■□□□□ 0
NCDN-203ENST00000373253 DBNDD1Q9H9R9 158 aa15.06■□□□□ 0
NCDN-203ENST00000373253 AFF2P51816 1311 aa15.06■□□□□ 0
NCDN-203ENST00000373253 RIOK3O14730 519 aaKnown RBP15.06■□□□□ 0
NCDN-203ENST00000373253 FANCCQ00597 558 aa15.06■□□□□ 0
NCDN-203ENST00000373253 CTR9Q6PD62 1173 aa15.06■□□□□ 0
NCDN-203ENST00000373253 USP17L2Q6R6M4 530 aa15.06■□□□□ 0
NCDN-203ENST00000373253 CDK5RAP3Q96JB5 506 aa15.06■□□□□ 0
NCDN-203ENST00000373253 DCP1AQ9NPI6 582 aaPredicted RBP15.06■□□□□ 0
NCDN-203ENST00000373253 NFE2L3Q9Y4A8 694 aa15.06■□□□□ 0
NCDN-203ENST00000373253 LDHCP07864 332 aa15.06■□□□□ 0
NCDN-203ENST00000373253 FGFR2P21802 821 aa15.06■□□□□ 0
NCDN-203ENST00000373253 PDE4CQ08493 712 aa15.06■□□□□ 0
NCDN-203ENST00000373253 PTGDRQ13258 359 aa15.06■□□□□ 0
NCDN-203ENST00000373253 URI1O94763 535 aaPredicted RBP15.05■□□□□ 0
NCDN-203ENST00000373253 NAA30Q147X3 362 aaPredicted RBP15.05■□□□□ 0
NCDN-203ENST00000373253 INF2Q27J81 1249 aa15.05■□□□□ 0
NCDN-203ENST00000373253 RILPL1Q5EBL4 403 aa15.05■□□□□ 0
NCDN-203ENST00000373253 VEGFAP15692 232 aaPredicted RBP15.05■□□□□ -0
NCDN-203ENST00000373253 SHC4Q6S5L8 630 aa15.05■□□□□ -0
NCDN-203ENST00000373253 FMR1NBQ8N0W7 255 aaPredicted RBP15.05■□□□□ -0
NCDN-203ENST00000373253 STAG2Q8N3U4 1231 aa15.05■□□□□ -0
NCDN-203ENST00000373253 CMA1P23946 247 aa15.05■□□□□ -0
NCDN-203ENST00000373253 ADKP55263 362 aaKnown RBP15.05■□□□□ -0
NCDN-203ENST00000373253 RAD51AP2Q09MP3 1159 aa15.05■□□□□ -0
NCDN-203ENST00000373253 TTC38Q5R3I4 469 aa15.05■□□□□ -0
NCDN-203ENST00000373253 KCNF1Q9H3M0 494 aa15.05■□□□□ -0
NCDN-203ENST00000373253 POLR3EQ9NVU0 708 aa15.05■□□□□ -0
NCDN-203ENST00000373253 ABCC12Q96J65 1359 aa15.05■□□□□ -0
NCDN-203ENST00000373253 ADAMTSL3P82987 1691 aa15.05■□□□□ -0
NCDN-203ENST00000373253 IFNAR1P17181 557 aa15.04■□□□□ -0
NCDN-203ENST00000373253 TNNI2P48788 182 aa15.04■□□□□ -0
NCDN-203ENST00000373253 SNW1Q13573 536 aaKnown RBP15.04■□□□□ -0
NCDN-203ENST00000373253 KARSQ15046 597 aaKnown RBP15.04■□□□□ -0
NCDN-203ENST00000373253 GRIK5Q16478 980 aa15.04■□□□□ -0
NCDN-203ENST00000373253 PPFIBP1Q86W92 1011 aa15.04■□□□□ -0
NCDN-203ENST00000373253 TTF2Q9UNY4 1162 aaKnown RBP15.04■□□□□ -0
NCDN-203ENST00000373253 THRAP3Q9Y2W1 955 aaKnown RBP15.04■□□□□ -0
NCDN-203ENST00000373253 MROH7-TTC4A0A0A0MT08 1334 aa15.04■□□□□ -0
NCDN-203ENST00000373253 MMP1P03956 469 aa15.04■□□□□ -0
NCDN-203ENST00000373253 CCDC178Q5BJE1 867 aa15.04■□□□□ -0
NCDN-203ENST00000373253 CEP135Q66GS9 1140 aa15.04■□□□□ -0
NCDN-203ENST00000373253 CLEC4GQ6UXB4 293 aa15.04■□□□□ -0
NCDN-203ENST00000373253 MNS1Q8NEH6 495 aa15.04■□□□□ -0
NCDN-203ENST00000373253 SCAF8Q9UPN6 1271 aaKnown RBP15.04■□□□□ -0
NCDN-203ENST00000373253 RIC1Q4ADV7 1423 aa15.04■□□□□ -0
NCDN-203ENST00000373253 TCRBV5S4A2TA0A5A2 114 aa15.04■□□□□ -0
NCDN-203ENST00000373253 FMNL1O95466 1100 aaPredicted RBP15.04■□□□□ -0
NCDN-203ENST00000373253 ZYXQ15942 572 aaKnown RBP15.04■□□□□ -0
NCDN-203ENST00000373253 SYT10Q6XYQ8 523 aa15.04■□□□□ -0
NCDN-203ENST00000373253 NSUN4Q96CB9 384 aaKnown RBP15.04■□□□□ -0
NCDN-203ENST00000373253 DNAI1Q9UI46 699 aa15.04■□□□□ -0
NCDN-203ENST00000373253 HSPA1LP34931 641 aa15.03■□□□□ -0
NCDN-203ENST00000373253 POSTNQ15063 836 aa15.03■□□□□ -0
NCDN-203ENST00000373253 VPS16Q9H269 839 aa15.03■□□□□ -0
NCDN-203ENST00000373253 BIN2Q9UBW5 565 aaPredicted RBP15.03■□□□□ -0
NCDN-203ENST00000373253 RTL9Q8NET4 1388 aa15.03■□□□□ -0
NCDN-203ENST00000373253 ZNF500O60304 480 aaPredicted RBP15.03■□□□□ -0
NCDN-203ENST00000373253 PRR29P0C7W0 189 aa15.03■□□□□ -0
NCDN-203ENST00000373253 STAT6P42226 847 aa15.03■□□□□ -0
NCDN-203ENST00000373253 MYL5Q02045 173 aa15.03■□□□□ -0
NCDN-203ENST00000373253 EYA3Q99504 573 aa15.03■□□□□ -0
NCDN-203ENST00000373253 TACC3Q9Y6A5 838 aa15.03■□□□□ -0
NCDN-203ENST00000373253 USP27XA6NNY8 438 aa15.03■□□□□ -0
NCDN-203ENST00000373253 TPM1P09493 284 aa15.03■□□□□ -0
NCDN-203ENST00000373253 LIFRP42702 1097 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms