RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 HDAC9Q9UKV0 1011 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 DAGLAQ9Y4D2 1042 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 CLIC4Q9Y696 253 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 FDPSP14324 419 aaKnown RBP5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 GUCY1A2P33402 732 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 CDK8P49336 464 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 MYSM1Q5VVJ2 828 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 NIM1KQ8IY84 436 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 SUPT20HQ8NEM7 779 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 IL17RAQ96F46 866 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 UBA5Q9GZZ9 404 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 RBSNQ9H1K0 784 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 RGS17Q9UGC6 210 aaPredicted RBP5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 NOL7Q9UMY1 257 aaKnown RBP5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 ZBTB12Q9Y330 459 aaPredicted RBP5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 CRKP46108 304 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 NR5A1Q13285 461 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 CCDC93Q567U6 631 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 C12orf60Q5U649 245 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 ANO1Q5XXA6 986 aa5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 GPKOWQ92917 476 aaPredicted RBP eCLIP5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 TDRD3Q9H7E2 651 aaKnown RBP5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 SCAF8Q9UPN6 1271 aaKnown RBP5.26□□□□□ -1.57
PCDH11X-204ENST00000373088 SHANK3Q9BYB0 1731 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 NWD2Q9ULI1 1742 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 FRMPD2Q68DX3 1309 aaPredicted RBP5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 AK9Q5TCS8 1911 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 CCDC194A0A1B0GVG4 234 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 IFNAR1P17181 557 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 DLGAP5Q15398 846 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 ZNF174Q15697 407 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 CLEC17AQ6ZS10 378 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 BRAPQ7Z569 592 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 CLEC10AQ8IUN9 316 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 CAMKK2Q96RR4 588 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 DDX19AQ9NUU7 478 aaKnown RBP5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 RBM28Q9NW13 759 aaKnown RBP5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 NUP98P52948 1817 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 NR1I2O75469 434 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 PARP1P09874 1014 aaKnown RBP5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 MSNP26038 577 aaKnown RBP5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 GNAQP50148 359 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 USP17L2Q6R6M4 530 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 SGMS1Q86VZ5 419 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 KCNG4Q8TDN1 519 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 MRPS27Q92552 414 aaKnown RBP5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 CCDC34Q96HJ3 373 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 SERPINB13Q9UIV8 391 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 TACC3Q9Y6A5 838 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 UBR2Q8IWV8 1755 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 MYO1BO43795 1136 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 SLURP2P0DP57 97 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 IL1R1P14778 569 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 KRT2P35908 639 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 NAPAP54920 295 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 KIF23Q02241 960 aaPredicted RBP5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 ZYXQ15942 572 aaKnown RBP5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 CCDC178Q5BJE1 867 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 PIK3AP1Q6ZUJ8 805 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 CERS3Q8IU89 383 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 SPC24Q8NBT2 197 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 RTFDC1Q9BY42 306 aaPredicted RBP5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 AGXT2Q9BYV1 514 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 FAM13BQ9NYF5 915 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 PODXL2Q9NZ53 605 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 USP25Q9UHP3 1055 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 NRAPQ86VF7 1730 aa5.25□□□□□ -1.57
PCDH11X-204ENST00000373088 FLT1P17948 1338 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 A0A087WWV3 80 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 GPR75-ASB3A0A0A6YYF3 556 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 KIF28PB7ZC32 967 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 KLRF2D3W0D1 207 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 GDF11O95390 407 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 FMNL1O95466 1100 aaPredicted RBP5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 CFAP100Q494V2 611 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 DALRD3Q5D0E6 543 aaKnown RBP5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 PIM2Q9P1W9 311 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 PCDHA7Q9UN72 937 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 PCDHAC2Q9Y5I4 1007 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 EP400Q96L91 3159 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 WDR19Q8NEZ3 1342 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 TRIM75PA6NK02 468 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 PCP11498 1178 aaKnown RBP5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 MCM7P33993 719 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 SYKP43405 635 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 NFIAQ12857 509 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 DNTTIP2Q5QJE6 756 aaKnown RBP5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 STYK1Q6J9G0 422 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 CDC42EP5Q6NZY7 148 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 ILDR1Q86SU0 546 aaPredicted RBP5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 CERS5Q8N5B7 392 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 CLIC6Q96NY7 704 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 TMEM47Q9BQJ4 181 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 TRIM5Q9C035 493 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 PPP4CP60510 307 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 CERKLQ49MI3 558 aaPredicted RBP5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 NOSTRINQ8IVI9 506 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 RTKN2Q8IZC4 609 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 STAG2Q8N3U4 1231 aa5.24□□□□□ -1.57
PCDH11X-204ENST00000373088 CNNM3Q8NE01 707 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms