RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ATP8A2Q9NTI2 1148 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 EXOC7Q9UPT5 735 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 LOC102724428A0A0B4J2F2 783 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 A0A1W2PQ27 194 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 A0A1W2PQ64 194 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 A0A1W2PQD8 194 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 IVLP07476 585 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 SIK1P57059 783 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 OTUD7BQ6GQQ9 843 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 TMED8Q6PL24 325 aaPredicted RBP11.75□□□□□ -0.53
NUP188-201ENST00000372577 REXO1Q8N1G1 1221 aaKnown RBP11.75□□□□□ -0.53
NUP188-201ENST00000372577 KIAA1468Q9P260 1216 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 KDM3AQ9Y4C1 1321 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 SLC1A4P43007 532 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 CCDC122Q5T0U0 273 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 APBB1IPQ7Z5R6 666 aaPredicted RBP11.75□□□□□ -0.53
NUP188-201ENST00000372577 LZTFL1Q9NQ48 299 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 RBM6P78332 1123 aaKnown RBP11.74□□□□□ -0.53
NUP188-201ENST00000372577 NAP1L3Q99457 506 aaPredicted RBP11.74□□□□□ -0.53
NUP188-201ENST00000372577 SYNCQ9H7C4 482 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 KCNG1Q9UIX4 513 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 SMTNP53814 917 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 CHRNDQ07001 517 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 CALCRLQ16602 461 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 CCDC84Q86UT8 332 aaPredicted RBP11.74□□□□□ -0.53
NUP188-201ENST00000372577 NFE2L3Q9Y4A8 694 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 VAV2P52735 878 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 KARSQ15046 597 aaKnown RBP11.74□□□□□ -0.53
NUP188-201ENST00000372577 MYL10Q9BUA6 226 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 PNMA2Q9UL42 364 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 LEMD3Q9Y2U8 911 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 KIF4AO95239 1232 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 PDIA3P30101 505 aaKnown RBP11.74□□□□□ -0.53
NUP188-201ENST00000372577 CABP7Q86V35 215 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 SNX29Q8TEQ0 813 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 PPP1R9BQ96SB3 815 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 NAPGQ99747 312 aaPredicted RBP11.74□□□□□ -0.53
NUP188-201ENST00000372577 CEP83Q9Y592 693 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 CEP152O94986 1710 aa11.74□□□□□ -0.53
NUP188-201ENST00000372577 USP17L12C9JPN9 530 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 USP17L21D6R901 530 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 TXKP42681 527 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 MTX1Q13505 466 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 TRMT1LQ7Z2T5 733 aaKnown RBP11.73□□□□□ -0.53
NUP188-201ENST00000372577 TGFBRAP1Q8WUH2 860 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 THRAP3Q9Y2W1 955 aaKnown RBP11.73□□□□□ -0.53
NUP188-201ENST00000372577 RPAP1Q9BWH6 1393 aaPredicted RBP11.73□□□□□ -0.53
NUP188-201ENST00000372577 ATP2A1O14983 1001 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 GNA14O95837 355 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 LMAN1P49257 510 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 GREM2Q9H772 168 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 MAPKAPK5Q8IW41 473 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 KIFAP3Q92845 792 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 TEKT1Q969V4 418 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 LRRC45Q96CN5 670 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 PLIN2Q99541 437 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 NSRP1Q9H0G5 558 aaKnown RBP11.73□□□□□ -0.53
NUP188-201ENST00000372577 MAGEF1Q9HAY2 307 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 TNKSO95271 1327 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 PFKFB1P16118 471 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 ARFGAP2Q8N6H7 521 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 DRC1Q96MC2 740 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 RTEL1Q9NZ71 1219 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 KCNJ14Q9UNX9 436 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 DNM3Q9UQ16 869 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 RFX7Q2KHR2 1363 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 CALRP27797 417 aaKnown RBP11.73□□□□□ -0.53
NUP188-201ENST00000372577 CRKLP46109 303 aaKnown RBP11.73□□□□□ -0.53
NUP188-201ENST00000372577 CLUL1Q15846 466 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 SIRT2Q8IXJ6 389 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 BLIDQ8IZY5 108 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 TCHPQ9BT92 498 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 PICK1Q9NRD5 415 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 MTUS1Q9ULD2 1270 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 IKBKGQ9Y6K9 419 aa11.73□□□□□ -0.53
NUP188-201ENST00000372577 INO80Q9ULG1 1556 aaPredicted RBP11.72□□□□□ -0.53
NUP188-201ENST00000372577 FBXO18Q8NFZ0 1043 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 SEC62Q99442 399 aaKnown RBP11.72□□□□□ -0.53
NUP188-201ENST00000372577 VPS16Q9H269 839 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 TRAPPC10P48553 1259 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 VPS54Q9P1Q0 977 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 TMOD4Q9NZQ9 345 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 PPP6R2O75170 966 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 GTF2F1P35269 517 aaKnown RBP eCLIP11.72□□□□□ -0.539e-7■■■■■ 27.6
NUP188-201ENST00000372577 CEP128Q6ZU80 1094 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 CCDC94Q9BW85 323 aaPredicted RBP11.72□□□□□ -0.53
NUP188-201ENST00000372577 KIAA1210Q9ULL0 1709 aa11.72□□□□□ -0.53
NUP188-201ENST00000372577 SCG2P13521 617 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 ARID5AQ03989 594 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 PPP2R3AQ06190 1150 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 MFSD14BQ5SR56 506 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 HDXQ7Z353 690 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 MRFAP1L1Q96HT8 127 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 MTRF1LQ9UGC7 380 aaKnown RBP11.71□□□□□ -0.53
NUP188-201ENST00000372577 BCAMP50895 628 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 SLC9C1Q4G0N8 1177 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms