RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ATP5JP18859 108 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 ZBTB1Q9Y2K1 713 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 PLVAPQ9BX97 442 aa14.9□□□□□ -0.02
RAPGEF1-201ENST00000372189 LZTS2Q9BRK4 669 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 KIF4AO95239 1232 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 HDXQ7Z353 690 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 FBF1Q8TES7 1133 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 ADGRL3Q9HAR2 1447 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 MYCLP12524 364 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 OTUD6BQ8N6M0 293 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 A0A1W2PRG0 241 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 HSP90AA4PQ58FG1 418 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 BEND3Q5T5X7 828 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 HS2ST1Q7LGA3 356 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 SPAG5Q96R06 1193 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 GMNNO75496 209 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 PRPHP41219 470 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 TERF1P54274 439 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 DNAJC21Q5F1R6 531 aaKnown RBP14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 DCAF15Q66K64 600 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 RBSNQ9H1K0 784 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 HOMER2Q9NSB8 354 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 IFNKQ9P0W0 207 aa14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 V9GY48 417 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF1-201ENST00000372189 CLNS1AP54105 237 aaKnown RBP14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 KIF5AQ12840 1032 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 ZNF174Q15697 407 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 XDHP47989 1333 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 BCAMP50895 628 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 SMCR8Q8TEV9 937 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 TCP10L2B9ZVM9 353 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 NOP56O00567 594 aaKnown RBP14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 SEC24BO95487 1268 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 PPM1FP49593 454 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 TMC4Q7Z404 712 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 CPXCR1Q8N123 301 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 AFF2P51816 1311 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 ZNF804BA4D1E1 1349 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 BLVRAP53004 296 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 KIAA0825Q8IV33 1275 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 FERMT1Q9BQL6 677 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 SCNN1DP51172 638 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 ATL3Q6DD88 541 aa14.88□□□□□ -0.03
RAPGEF1-201ENST00000372189 BICDL2A1A5D9 508 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 ADCY7P51828 1080 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 CEP57Q86XR8 500 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 SULF1Q8IWU6 871 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 SPATS2LQ9NUQ6 558 aaKnown RBP14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 CCNT1O60563 726 aaKnown RBP14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 TFAP4Q01664 338 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 INF2Q27J81 1249 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 ZNF569Q5MCW4 686 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 PLEKHF1Q96S99 279 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 USP44Q9H0E7 712 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 GREM2Q9H772 168 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 CDC42BPAQ5VT25 1732 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 PPARAQ07869 468 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 LMBR1Q8WVP7 490 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 PLIN2Q99541 437 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 PDE1CQ14123 709 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 LRRC43Q8N309 656 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 ARFGAP2Q8N6H7 521 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 IKBKGQ9Y6K9 419 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 ABCC4O15439 1325 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 CPA1P15085 419 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 CCT6AP40227 531 aaKnown RBP14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 KARSQ15046 597 aaKnown RBP14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 USH1GQ495M9 461 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 PIK3AP1Q6ZUJ8 805 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 TTC14Q96N46 770 aa14.87□□□□□ -0.03
RAPGEF1-201ENST00000372189 PPP2R5BQ15173 497 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 SV2BQ7L1I2 683 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 MRFAP1L1Q96HT8 127 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 CEP104O60308 925 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 DKC1O60832 514 aaKnown RBP eCLIP14.86□□□□□ -0.032e-7■■■■■ 54.4
RAPGEF1-201ENST00000372189 IQUBQ8NA54 791 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 CCDC77Q9BR77 488 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 FAM114A2Q9NRY5 505 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 LEMD3Q9Y2U8 911 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 PLA2R1Q13018 1463 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 SGSM2O43147 1006 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 KCNQ4P56696 695 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 FAM76AQ8TAV0 307 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 VWA3AA6NCI4 1184 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 ERFEQ4G0M1 354 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 CCDC65Q8IXS2 484 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 DDX27Q96GQ7 796 aaKnown RBP14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 DSCC1Q9BVC3 393 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 SNX14Q9Y5W7 946 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 STK24Q9Y6E0 443 aa14.86□□□□□ -0.03
RAPGEF1-201ENST00000372189 GCKP35557 465 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 PLCD1P51178 756 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 LRRC24Q50LG9 513 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 RILPL1Q5EBL4 403 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 FAM47AQ5JRC9 791 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 NSMFQ6X4W1 530 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 MYRIPQ8NFW9 859 aa14.85□□□□□ -0.03
RAPGEF1-201ENST00000372189 KIFC2Q96AC6 838 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms