RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
PTPN1-201ENST00000371621 SPAG1Q07617 926 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 SLC30A9Q6PML9 568 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 IFT74Q96LB3 600 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 C14orf93Q9H972 538 aaKnown RBP13.14□□□□□ -0.31
PTPN1-201ENST00000371621 SLC40A1Q9NP59 571 aa13.14□□□□□ -0.31
PTPN1-201ENST00000371621 EIF3HO15372 352 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTPN1-201ENST00000371621 BUB1O43683 1085 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 RAD21O60216 631 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
PTPN1-201ENST00000371621 TSNAXIP1Q2TAA8 658 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 ATL3Q6DD88 541 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 RNF168Q8IYW5 571 aaPredicted RBP13.13□□□□□ -0.31
PTPN1-201ENST00000371621 BLZF1Q9H2G9 400 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 PFKFB2O60825 505 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 SGSM3Q96HU1 749 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 CHPF2Q9P2E5 772 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 NFU1Q9UMS0 254 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 RWDD2BP57060 319 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 CCDC155Q8N6L0 562 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 MIPOL1Q8TD10 442 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 ASXL2Q76L83 1435 aa13.13□□□□□ -0.31
PTPN1-201ENST00000371621 KCNB1Q14721 858 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
PTPN1-201ENST00000371621 FAM184BQ9ULE4 1060 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 BTBD11A6QL63 1104 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 TEX33O43247 280 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 CRYMQ14894 314 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 KIAA0753Q2KHM9 967 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 TMEM67Q5HYA8 995 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 TYW1BQ6NUM6 668 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 RUFY4Q6ZNE9 571 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 USP44Q9H0E7 712 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 ADGRG1Q9Y653 693 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 MAEAQ7L5Y9 396 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 AMOTL1Q8IY63 956 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 CEP120Q8N960 986 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 ANKRD42Q8N9B4 389 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 PPFIBP2Q8ND30 876 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 OR8K1Q8NGG5 319 aa13.12□□□□□ -0.31
PTPN1-201ENST00000371621 NOP53Q9NZM5 478 aaKnown RBP13.12□□□□□ -0.31
PTPN1-201ENST00000371621 IKBKBO14920 756 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 EVI5O60447 810 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 INTS8Q75QN2 995 aaKnown RBP13.11□□□□□ -0.31
PTPN1-201ENST00000371621 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 CCT8L2Q96SF2 557 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 CABP5Q9NP86 173 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 KRT13P13646 458 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 CMA1P23946 247 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 CDC25AP30304 524 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 PPARAQ07869 468 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 ADCY1Q08828 1119 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 SNX1Q13596 522 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 LINC00301Q8NCQ3 95 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 NCOA7Q8NI08 942 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 DUOX2Q9NRD8 1548 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 GBP1P32455 592 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
PTPN1-201ENST00000371621 NLRP14Q86W24 1093 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 CCDC13Q8IYE1 715 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 CCDC197Q8NCU1 140 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
PTPN1-201ENST00000371621 HAUS4Q9H6D7 363 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 SWAP70Q9UH65 585 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 NOVA2Q9UNW9 492 aaKnown RBP13.11□□□□□ -0.31
PTPN1-201ENST00000371621 ARHGEF5Q12774 1597 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 PREX2Q70Z35 1606 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 FAM135BQ49AJ0 1406 aa13.11□□□□□ -0.31
PTPN1-201ENST00000371621 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 KIF3CO14782 793 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 ZNF185O15231 689 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 A1BGP04217 495 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 MAGEA1P43355 309 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 ZBTB16Q05516 673 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 PDE1CQ14123 709 aaPredicted RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 SWT1Q5T5J6 900 aaKnown RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 LONP2Q86WA8 852 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 CTNNBL1Q8WYA6 563 aaPredicted RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 ZBTB43O43298 467 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 CEP104O60308 925 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 HEXIM1O94992 359 aaKnown RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 TNNC1P63316 161 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 APBA1Q02410 837 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 WASF1Q92558 559 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 HVCN1Q96D96 273 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 MMS19Q96T76 1030 aa13.1□□□□□ -0.31
PTPN1-201ENST00000371621 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
PTPN1-201ENST00000371621 ACTR5Q9H9F9 607 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms