RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 TTC6Q86TZ1 520 aa19.44■□□□□ 0.7
SCP2-201ENST00000371509 APOBEC3FQ8IUX4 373 aaKnown RBP19.44■□□□□ 0.7
SCP2-201ENST00000371509 BRF1Q92994 677 aa19.44■□□□□ 0.7
SCP2-201ENST00000371509 CSRNP1Q96S65 589 aa19.44■□□□□ 0.7
SCP2-201ENST00000371509 ANAPC4Q9UJX5 808 aa19.44■□□□□ 0.7
SCP2-201ENST00000371509 NEDD4P46934 1319 aa19.44■□□□□ 0.7
SCP2-201ENST00000371509 AKNAD1Q5T1N1 836 aa19.43■□□□□ 0.7
SCP2-201ENST00000371509 DCPSQ96C86 337 aaKnown RBP19.43■□□□□ 0.7
SCP2-201ENST00000371509 LRRC2Q9BYS8 371 aa19.43■□□□□ 0.7
SCP2-201ENST00000371509 DHX36Q9H2U1 1008 aaKnown RBP19.43■□□□□ 0.7
SCP2-201ENST00000371509 MTMR6Q9Y217 621 aa19.43■□□□□ 0.7
SCP2-201ENST00000371509 ATRNL1Q5VV63 1379 aa19.43■□□□□ 0.7
SCP2-201ENST00000371509 HLA-DOAP06340 250 aa19.43■□□□□ 0.7
SCP2-201ENST00000371509 PDIA4P13667 645 aaKnown RBP19.43■□□□□ 0.7
SCP2-201ENST00000371509 RRP12Q5JTH9 1297 aaKnown RBP19.43■□□□□ 0.7
SCP2-201ENST00000371509 PNMA8AQ86V59 439 aaPredicted RBP19.43■□□□□ 0.7
SCP2-201ENST00000371509 MB21D2Q8IYB1 491 aaPredicted RBP19.43■□□□□ 0.7
SCP2-201ENST00000371509 GZF1Q9H116 711 aaPredicted RBP19.43■□□□□ 0.7
SCP2-201ENST00000371509 TOMM22Q9NS69 142 aa19.43■□□□□ 0.7
SCP2-201ENST00000371509 CLEC11AQ9Y240 323 aa19.43■□□□□ 0.7
SCP2-201ENST00000371509 WDR19Q8NEZ3 1342 aa19.43■□□□□ 0.7
SCP2-201ENST00000371509 ADM5C9JUS6 153 aa19.42■□□□□ 0.7
SCP2-201ENST00000371509 PFKFB2O60825 505 aa19.42■□□□□ 0.7
SCP2-201ENST00000371509 MFSD6Q6ZSS7 791 aa19.42■□□□□ 0.7
SCP2-201ENST00000371509 STAG1Q8WVM7 1258 aa19.42■□□□□ 0.7
SCP2-201ENST00000371509 TEPSINQ96N21 525 aa19.42■□□□□ 0.7
SCP2-201ENST00000371509 PI4KBQ9UBF8 816 aa19.42■□□□□ 0.7
SCP2-201ENST00000371509 PGAP2Q9UHJ9 254 aa19.42■□□□□ 0.7
SCP2-201ENST00000371509 SERPINB13Q9UIV8 391 aa19.42■□□□□ 0.7
SCP2-201ENST00000371509 COL2A1P02458 1487 aaPredicted RBP19.41■□□□□ 0.7
SCP2-201ENST00000371509 ROBO3Q96MS0 1386 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 PITPNM2Q9BZ72 1349 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 B4E1Z4 1266 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 F13A1P00488 732 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 MYH8P13535 1937 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 FSD2A1L4K1 749 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 SLC3A2P08195 630 aaKnown RBP19.41■□□□□ 0.7
SCP2-201ENST00000371509 EVCP57679 992 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 STK3Q13188 491 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 MIGA2Q7L4E1 593 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 SULF1Q8IWU6 871 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 CRACR2BQ8N4Y2 399 aaPredicted RBP19.41■□□□□ 0.7
SCP2-201ENST00000371509 DNAJC18Q9H819 358 aa19.41■□□□□ 0.7
SCP2-201ENST00000371509 DDX49Q9Y6V7 483 aaKnown RBP19.41■□□□□ 0.7
SCP2-201ENST00000371509 PRPF40AO75400 957 aaKnown RBP19.4■□□□□ 0.7
SCP2-201ENST00000371509 PDCP20941 246 aa19.4■□□□□ 0.7
SCP2-201ENST00000371509 CDK8P49336 464 aa19.4■□□□□ 0.7
SCP2-201ENST00000371509 FGD1P98174 961 aa19.4■□□□□ 0.7
SCP2-201ENST00000371509 GABPAQ06546 454 aa19.4■□□□□ 0.7
SCP2-201ENST00000371509 NBPF12Q5TAG4 269 aaPredicted RBP19.4■□□□□ 0.7
SCP2-201ENST00000371509 C16orf86Q6ZW13 317 aa19.4■□□□□ 0.7
SCP2-201ENST00000371509 CHST3Q7LGC8 479 aa19.4■□□□□ 0.7
SCP2-201ENST00000371509 KRT26Q7Z3Y9 468 aa19.4■□□□□ 0.7
SCP2-201ENST00000371509 ZC3H15Q8WU90 426 aaKnown RBP19.4■□□□□ 0.7
SCP2-201ENST00000371509 PDE4BQ07343 736 aa19.39■□□□□ 0.7
SCP2-201ENST00000371509 APOBRQ0VD83 1088 aa19.39■□□□□ 0.7
SCP2-201ENST00000371509 SCRN1Q12765 414 aa19.39■□□□□ 0.7
SCP2-201ENST00000371509 TMEM87AQ8NBN3 555 aa19.39■□□□□ 0.7
SCP2-201ENST00000371509 NCOA7Q8NI08 942 aa19.39■□□□□ 0.7
SCP2-201ENST00000371509 LLPHQ9BRT6 129 aaKnown RBP19.39■□□□□ 0.7
SCP2-201ENST00000371509 RNF41Q9H4P4 317 aaPredicted RBP19.39■□□□□ 0.7
SCP2-201ENST00000371509 MKNK2Q9HBH9 465 aa19.39■□□□□ 0.7
SCP2-201ENST00000371509 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.39■□□□□ 0.7
SCP2-201ENST00000371509 DTNBO60941 627 aa19.39■□□□□ 0.69
SCP2-201ENST00000371509 MCM5P33992 734 aa19.39■□□□□ 0.69
SCP2-201ENST00000371509 ANTXR2P58335 489 aa19.39■□□□□ 0.69
SCP2-201ENST00000371509 TRDNQ13061 729 aa19.39■□□□□ 0.69
SCP2-201ENST00000371509 MAP1SQ66K74 1059 aaPredicted RBP19.39■□□□□ 0.69
SCP2-201ENST00000371509 USP48Q86UV5 1035 aa19.39■□□□□ 0.69
SCP2-201ENST00000371509 GLIS2Q9BZE0 524 aaPredicted RBP19.39■□□□□ 0.69
SCP2-201ENST00000371509 EHD4Q9H223 541 aa19.39■□□□□ 0.69
SCP2-201ENST00000371509 RANBP6O60518 1105 aaKnown RBP19.38■□□□□ 0.69
SCP2-201ENST00000371509 KDM4AO75164 1064 aa19.38■□□□□ 0.69
SCP2-201ENST00000371509 FGRP09769 529 aa19.38■□□□□ 0.69
SCP2-201ENST00000371509 FAM47AQ5JRC9 791 aa19.38■□□□□ 0.69
SCP2-201ENST00000371509 L1TD1Q5T7N2 865 aaKnown RBP19.38■□□□□ 0.69
SCP2-201ENST00000371509 RALYLQ86SE5 291 aaKnown RBP19.38■□□□□ 0.69
SCP2-201ENST00000371509 SMARCC2Q8TAQ2 1214 aa19.38■□□□□ 0.69
SCP2-201ENST00000371509 GPT2Q8TD30 523 aa19.38■□□□□ 0.69
SCP2-201ENST00000371509 ZNF274Q96GC6 653 aaPredicted RBP19.38■□□□□ 0.69
SCP2-201ENST00000371509 TRIM34Q9BYJ4 488 aa19.38■□□□□ 0.69
SCP2-201ENST00000371509 FZD1Q9UP38 647 aa19.38■□□□□ 0.69
SCP2-201ENST00000371509 PRC1O43663 620 aa19.37■□□□□ 0.69
SCP2-201ENST00000371509 SHMT1P34896 483 aa19.37■□□□□ 0.69
SCP2-201ENST00000371509 LARP1BQ659C4 914 aaKnown RBP19.37■□□□□ 0.69
SCP2-201ENST00000371509 CYB5R4Q7L1T6 521 aa19.37■□□□□ 0.69
SCP2-201ENST00000371509 FOXP4Q8IVH2 680 aaPredicted RBP19.37■□□□□ 0.69
SCP2-201ENST00000371509 GPBP1L1Q9HC44 474 aaPredicted RBP19.37■□□□□ 0.69
SCP2-201ENST00000371509 ISY1Q9ULR0 285 aaKnown RBP19.37■□□□□ 0.69
SCP2-201ENST00000371509 ATP6V1DQ9Y5K8 247 aa19.37■□□□□ 0.69
SCP2-201ENST00000371509 JAK2O60674 1132 aa19.37■□□□□ 0.69
SCP2-201ENST00000371509 CNNM2Q9H8M5 875 aa19.37■□□□□ 0.69
SCP2-201ENST00000371509 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.37■□□□□ 0.69
SCP2-201ENST00000371509 ZSWIM5Q9P217 1185 aa19.37■□□□□ 0.69
SCP2-201ENST00000371509 RASA1P20936 1047 aa19.36■□□□□ 0.69
SCP2-201ENST00000371509 PDIA3P30101 505 aaKnown RBP19.36■□□□□ 0.69
SCP2-201ENST00000371509 NSUN7Q8NE18 718 aaKnown RBP19.36■□□□□ 0.69
SCP2-201ENST00000371509 ZKSCAN3Q9BRR0 538 aa19.36■□□□□ 0.69
SCP2-201ENST00000371509 KRT23Q9C075 422 aa19.36■□□□□ 0.69
SCP2-201ENST00000371509 PPP2R3BQ9Y5P8 575 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms