RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 CPA1P15085 419 aa20.81■□□□□ 0.92
VPS37B-202ENST00000371248 ZNF341Q9BYN7 854 aa20.81■□□□□ 0.92
VPS37B-202ENST00000371248 ZSWIM5Q9P217 1185 aa20.81■□□□□ 0.92
VPS37B-202ENST00000371248 TSPY2A6NKD2 308 aa20.81■□□□□ 0.92
VPS37B-202ENST00000371248 ITGBL1O95965 494 aaPredicted RBP20.81■□□□□ 0.92
VPS37B-202ENST00000371248 TFAP4Q01664 338 aa20.81■□□□□ 0.92
VPS37B-202ENST00000371248 RRP1BQ14684 758 aaKnown RBP20.81■□□□□ 0.92
VPS37B-202ENST00000371248 BLOC1S2Q6QNY1 142 aa20.81■□□□□ 0.92
VPS37B-202ENST00000371248 CHST3Q7LGC8 479 aa20.81■□□□□ 0.92
VPS37B-202ENST00000371248 MB21D2Q8IYB1 491 aaPredicted RBP20.81■□□□□ 0.92
VPS37B-202ENST00000371248 UPF3BQ9BZI7 483 aaKnown RBP20.81■□□□□ 0.92
VPS37B-202ENST00000371248 TM6SF1Q9BZW5 370 aa20.81■□□□□ 0.92
VPS37B-202ENST00000371248 ZNF408Q9H9D4 720 aa20.81■□□□□ 0.92
VPS37B-202ENST00000371248 PHF20L1A8MW92 1017 aa20.8■□□□□ 0.92
VPS37B-202ENST00000371248 PPP1R12BO60237 982 aaPredicted RBP20.8■□□□□ 0.92
VPS37B-202ENST00000371248 CYB5R4Q7L1T6 521 aa20.8■□□□□ 0.92
VPS37B-202ENST00000371248 ZSWIM6Q9HCJ5 1215 aa20.8■□□□□ 0.92
VPS37B-202ENST00000371248 USP2O75604 605 aaPredicted RBP20.79■□□□□ 0.92
VPS37B-202ENST00000371248 GDF11O95390 407 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 HMGB1P09429 215 aaKnown RBP20.79■□□□□ 0.92
VPS37B-202ENST00000371248 TSPY3P0CV98 308 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 TSPY8P0CW00 308 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 AKR1B1P15121 316 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 ATAD5Q96QE3 1844 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 MPHOSPH10O00566 681 aaKnown RBP20.79■□□□□ 0.92
VPS37B-202ENST00000371248 TOMM70O94826 608 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 MCM5P33992 734 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 RUFY3Q7L099 469 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 CCDC17Q96LX7 622 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 TRPM7Q96QT4 1865 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 CYP46A1Q9Y6A2 500 aa20.79■□□□□ 0.92
VPS37B-202ENST00000371248 TTLL12Q14166 644 aaPredicted RBP20.78■□□□□ 0.92
VPS37B-202ENST00000371248 DHX32Q7L7V1 743 aaKnown RBP20.78■□□□□ 0.92
VPS37B-202ENST00000371248 SMC1BQ8NDV3 1235 aa20.78■□□□□ 0.92
VPS37B-202ENST00000371248 KLRG1Q96E93 195 aa20.78■□□□□ 0.92
VPS37B-202ENST00000371248 TCEANC2Q96MN5 208 aa20.78■□□□□ 0.92
VPS37B-202ENST00000371248 WRNIP1Q96S55 665 aa20.78■□□□□ 0.92
VPS37B-202ENST00000371248 ZKSCAN3Q9BRR0 538 aa20.78■□□□□ 0.92
VPS37B-202ENST00000371248 ABCB5Q2M3G0 1257 aa20.77■□□□□ 0.92
VPS37B-202ENST00000371248 SHROOM1Q2M3G4 852 aaPredicted RBP20.77■□□□□ 0.92
VPS37B-202ENST00000371248 ZNF112Q9UJU3 913 aa20.77■□□□□ 0.92
VPS37B-202ENST00000371248 ANGEL1Q9UNK9 670 aaKnown RBP20.77■□□□□ 0.92
VPS37B-202ENST00000371248 PRC1O43663 620 aa20.77■□□□□ 0.92
VPS37B-202ENST00000371248 RPS6KB1P23443 525 aa20.77■□□□□ 0.92
VPS37B-202ENST00000371248 INPP5BP32019 993 aa20.77■□□□□ 0.92
VPS37B-202ENST00000371248 CAP2P40123 477 aa20.77■□□□□ 0.92
VPS37B-202ENST00000371248 NT5C2P49902 561 aa20.77■□□□□ 0.92
VPS37B-202ENST00000371248 ANTXR2P58335 489 aa20.77■□□□□ 0.92
VPS37B-202ENST00000371248 EXOSC10Q01780 885 aaKnown RBP20.77■□□□□ 0.92
VPS37B-202ENST00000371248 NEDD1Q8NHV4 660 aa20.77■□□□□ 0.92
VPS37B-202ENST00000371248 RBM46Q8TBY0 533 aaKnown RBP20.77■□□□□ 0.92
VPS37B-202ENST00000371248 NEK4P51957 841 aa20.76■□□□□ 0.91
VPS37B-202ENST00000371248 JAG1P78504 1218 aa20.76■□□□□ 0.91
VPS37B-202ENST00000371248 MOB2Q70IA6 237 aa20.76■□□□□ 0.91
VPS37B-202ENST00000371248 CABP5Q9NP86 173 aa20.76■□□□□ 0.91
VPS37B-202ENST00000371248 NMT2O60551 498 aa20.76■□□□□ 0.91
VPS37B-202ENST00000371248 CTNND1O60716 968 aaKnown RBP20.76■□□□□ 0.91
VPS37B-202ENST00000371248 CELF2O95319 508 aaKnown RBP20.76■□□□□ 0.91
VPS37B-202ENST00000371248 GH2P01242 217 aa20.76■□□□□ 0.91
VPS37B-202ENST00000371248 IREB2P48200 963 aaKnown RBP20.76■□□□□ 0.91
VPS37B-202ENST00000371248 RABEP1Q15276 862 aa20.76■□□□□ 0.91
VPS37B-202ENST00000371248 IQCA1Q86XH1 822 aa20.76■□□□□ 0.91
VPS37B-202ENST00000371248 ZKSCAN4Q969J2 545 aaPredicted RBP20.76■□□□□ 0.91
VPS37B-202ENST00000371248 LRRC2Q9BYS8 371 aa20.76■□□□□ 0.91
VPS37B-202ENST00000371248 GREB1LQ9C091 1923 aaPredicted RBP20.76■□□□□ 0.91
VPS37B-202ENST00000371248 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.75■□□□□ 0.91
VPS37B-202ENST00000371248 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.75■□□□□ 0.91
VPS37B-202ENST00000371248 OTOFQ9HC10 1997 aa20.75■□□□□ 0.91
VPS37B-202ENST00000371248 DOCK1Q14185 1865 aa20.75■□□□□ 0.91
VPS37B-202ENST00000371248 ARMC9Q7Z3E5 817 aa20.74■□□□□ 0.91
VPS37B-202ENST00000371248 ZSCAN10Q96SZ4 725 aaPredicted RBP20.74■□□□□ 0.91
VPS37B-202ENST00000371248 UBAC1Q9BSL1 405 aa20.74■□□□□ 0.91
VPS37B-202ENST00000371248 IL17RBQ9NRM6 502 aa20.74■□□□□ 0.91
VPS37B-202ENST00000371248 IFIT3O14879 490 aaKnown RBP20.74■□□□□ 0.91
VPS37B-202ENST00000371248 MAP3K9P80192 1104 aa20.74■□□□□ 0.91
VPS37B-202ENST00000371248 RAB3GAP1Q15042 981 aa20.74■□□□□ 0.91
VPS37B-202ENST00000371248 TMEM179Q6ZVK1 233 aa20.74■□□□□ 0.91
VPS37B-202ENST00000371248 PDRG1Q9NUG6 133 aa20.74■□□□□ 0.91
VPS37B-202ENST00000371248 ZBTB21Q9ULJ3 1066 aa20.74■□□□□ 0.91
VPS37B-202ENST00000371248 SEPT2Q15019 361 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 MAP3K11Q16584 847 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 CST9Q5W186 159 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 Q6ZUG5 572 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 GBA2Q9HCG7 927 aaPredicted RBP20.73■□□□□ 0.91
VPS37B-202ENST00000371248 TCP11L1Q9NUJ3 509 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.73■□□□□ 0.91
VPS37B-202ENST00000371248 TNKSO95271 1327 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 WDR19Q8NEZ3 1342 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 PASKQ96RG2 1323 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 PLIN4Q96Q06 1357 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 ERICH2A1L162 156 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 ASNSP08243 561 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 GUCY1A2P33402 732 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 FGD1P98174 961 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 SART3Q15020 963 aaKnown RBP20.73■□□□□ 0.91
VPS37B-202ENST00000371248 SCYL3Q8IZE3 742 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 IGDCC4Q8TDY8 1250 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 CEP95Q96GE4 821 aa20.73■□□□□ 0.91
VPS37B-202ENST00000371248 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.73■□□□□ 0.91
VPS37B-202ENST00000371248 MYH4Q9Y623 1939 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms