RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 ABCC10Q5T3U5 1492 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 CETN3O15182 167 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 GIGYF1O75420 1035 aaPredicted RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 PARP1P09874 1014 aaKnown RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 PPP1R2P41236 205 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 GOLGA8FQ08AF8 430 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 GOLGA8DPQ0D2H9 430 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 DPCR1Q3MIW9 517 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 HERC4Q5GLZ8 1057 aaPredicted RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 TYW1BQ6NUM6 668 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 C11orf57Q6ZUT1 292 aaPredicted RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 ZNF622Q969S3 477 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 IFIH1Q9BYX4 1025 aaKnown RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 SAP30BPQ9UHR5 308 aaKnown RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 DDX41Q9UJV9 622 aaKnown RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 SPOPO43791 374 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 CCNT1O60563 726 aaKnown RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 SCRN1Q12765 414 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 C2CD5Q86YS7 1000 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 NOSTRINQ8IVI9 506 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 PHF23Q9BUL5 403 aaPredicted RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 NUP58Q9BVL2 599 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 GPCPD1Q9NPB8 672 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 ZBTB21Q9ULJ3 1066 aa8.6□□□□□ -1.03
COL21A1-203ENST00000370819 CFAP65Q6ZU64 1925 aaKnown RBP8.6□□□□□ -1.03
COL21A1-203ENST00000370819 LARGE1O95461 756 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 FGAP02671 866 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 EIF6P56537 245 aaKnown RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 RBM6P78332 1123 aaKnown RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 RRAGAQ7L523 313 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 NKIRAS1Q9NYS0 192 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 TBC1D7Q9P0N9 293 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 LRWD1Q9UFC0 647 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 CYP21A2P08686 494 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 PDIA3P30101 505 aaKnown RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 MRPL12P52815 198 aaKnown RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 PAK2Q13177 524 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 SETDB1Q15047 1291 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 KRT71Q3SY84 523 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 LRRC45Q96CN5 670 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 SMC6Q96SB8 1091 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 MKRN1Q9UHC7 482 aaKnown RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 CCDC160A6NGH7 325 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 SEC31AO94979 1220 aaKnown RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 LACTBP83111 547 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 KLHL30Q0D2K2 578 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 DAAM2Q86T65 1068 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 CCDC84Q86UT8 332 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 POTEDQ86YR6 584 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 NELFCDQ8IXH7 590 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 ZNF654Q8IZM8 581 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 SNX29Q8TEQ0 813 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 MRRFQ96E11 262 aaKnown RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 RSRC1Q96IZ7 334 aaKnown RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 ORAI2Q96SN7 254 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 SLC52A2Q9HAB3 445 aa8.59□□□□□ -1.03
COL21A1-203ENST00000370819 TLR7Q9NYK1 1049 aaKnown RBP8.59□□□□□ -1.03
COL21A1-203ENST00000370819 A0A1B0GUA9 196 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 ACTN4O43707 911 aaKnown RBP8.59□□□□□ -1.04
COL21A1-203ENST00000370819 TNFAIP3P21580 790 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 GUCY2FP51841 1108 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 MAP3K9P80192 1104 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 DMTNQ08495 405 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 CFAP221Q4G0U5 840 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 RUFY4Q6ZNE9 571 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 INTS8Q75QN2 995 aaKnown RBP8.59□□□□□ -1.04
COL21A1-203ENST00000370819 TEX11Q8IYF3 940 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 CCDC63Q8NA47 563 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 ZC3H12CQ9C0D7 883 aaKnown RBP8.59□□□□□ -1.04
COL21A1-203ENST00000370819 PDE11AQ9HCR9 933 aa8.59□□□□□ -1.04
COL21A1-203ENST00000370819 ATP1A2P50993 1020 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 TRAF1Q13077 416 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 ASIC2Q16515 512 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 VWA3BQ502W6 1294 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 ZNF804AQ7Z570 1209 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 DNAJC10Q8IXB1 793 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 ANKRD13CQ8N6S4 541 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 BCAS4Q8TDM0 211 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 LPIN2Q92539 896 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 PPP1R13BQ96KQ4 1090 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 IMPG2Q9BZV3 1241 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 AATFQ9NY61 560 aaKnown RBP eCLIP8.58□□□□□ -1.04
COL21A1-203ENST00000370819 FAM135BQ49AJ0 1406 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 PLCG2P16885 1265 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 ARID4AP29374 1257 aaPredicted RBP8.58□□□□□ -1.04
COL21A1-203ENST00000370819 NONOQ15233 471 aaKnown RBP eCLIP8.58□□□□□ -1.04
COL21A1-203ENST00000370819 RPS6KA1Q15418 735 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 DDB1Q16531 1140 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 WHAMMP3Q1A5X7 153 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 SEL1L2Q5TEA6 688 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 ZNF589Q86UQ0 364 aaPredicted RBP8.58□□□□□ -1.04
COL21A1-203ENST00000370819 PPANQ9NQ55 473 aaKnown RBP8.58□□□□□ -1.04
COL21A1-203ENST00000370819 STIM2Q9P246 746 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 DBNLQ9UJU6 430 aaKnown RBP8.58□□□□□ -1.04
COL21A1-203ENST00000370819 DENND2AQ9ULE3 1009 aa8.58□□□□□ -1.04
COL21A1-203ENST00000370819 TBX22Q9Y458 520 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms