RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 ALDH1L1O75891 902 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 ITGB2P05107 769 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 NEXNQ0ZGT2 675 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 GPR162Q16538 588 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 PRPF40BQ6NWY9 871 aaKnown RBP10.33□□□□□ -0.76
COL21A1-202ENST00000370817 TTLL6Q8N841 843 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 AIDAQ96BJ3 306 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 CRAMP1Q96RY5 1269 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 PLA2G12BQ9BX93 195 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 ZCCHC2Q9C0B9 1178 aaKnown RBP10.33□□□□□ -0.76
COL21A1-202ENST00000370817 ALG2Q9H553 416 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 NOB1Q9ULX3 412 aaKnown RBP10.33□□□□□ -0.76
COL21A1-202ENST00000370817 BCS1LQ9Y276 419 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 USP3Q9Y6I4 520 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 RTL9Q8NET4 1388 aa10.33□□□□□ -0.76
COL21A1-202ENST00000370817 A6NJY4 79 aa10.32□□□□□ -0.76
COL21A1-202ENST00000370817 NPHP1O15259 732 aa10.32□□□□□ -0.76
COL21A1-202ENST00000370817 GRIN3BO60391 1043 aa10.32□□□□□ -0.76
COL21A1-202ENST00000370817 MTFR1Q15390 333 aa10.32□□□□□ -0.76
COL21A1-202ENST00000370817 FIGNL1Q6PIW4 674 aa10.32□□□□□ -0.76
COL21A1-202ENST00000370817 GOLGA6L1Q8N7Z2 621 aa10.32□□□□□ -0.76
COL21A1-202ENST00000370817 C1orf216Q8TAB5 229 aa10.32□□□□□ -0.76
COL21A1-202ENST00000370817 EDARADDQ8WWZ3 215 aa10.32□□□□□ -0.76
COL21A1-202ENST00000370817 WWC3Q9ULE0 1092 aa10.32□□□□□ -0.76
COL21A1-202ENST00000370817 PDE8AO60658 829 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 SKIP12755 728 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 PRELPP51888 382 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 SLC51AQ86UW1 340 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 JARID2Q92833 1246 aaPredicted RBP10.31□□□□□ -0.76
COL21A1-202ENST00000370817 ZNF622Q969S3 477 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL21A1-202ENST00000370817 POM121Q96HA1 1249 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 KAZALD1Q96I82 304 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 GGA1Q9UJY5 639 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 HCN2Q9UL51 889 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 TNNQ9UQP3 1299 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 PCDHGC4Q9Y5F7 938 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 COL4A5P29400 1685 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
COL21A1-202ENST00000370817 NFKBIEO00221 500 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 GRM8O00222 908 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 CDK2AP1O14519 115 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 CSF1RP07333 972 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 TRIM27P14373 513 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 ALDH1B1P30837 517 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 CTSWP56202 376 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 EML3Q32P44 896 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 SLCO4C1Q6ZQN7 724 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 UBE3BQ7Z3V4 1068 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 NLRP8Q86W28 1048 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 TTLL11Q8NHH1 800 aa10.3□□□□□ -0.76
COL21A1-202ENST00000370817 RBM17Q96I25 401 aaKnown RBP10.3□□□□□ -0.76
COL21A1-202ENST00000370817 API5Q9BZZ5 524 aaKnown RBP10.3□□□□□ -0.76
COL21A1-202ENST00000370817 SCN9AQ15858 1988 aa10.29□□□□□ -0.76
COL21A1-202ENST00000370817 NBPF7P0C2Y1 421 aaPredicted RBP10.29□□□□□ -0.76
COL21A1-202ENST00000370817 FOXO4P98177 505 aa10.29□□□□□ -0.76
COL21A1-202ENST00000370817 GRAPQ13588 217 aa10.29□□□□□ -0.76
COL21A1-202ENST00000370817 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
COL21A1-202ENST00000370817 SLC4A10Q6U841 1118 aa10.29□□□□□ -0.76
COL21A1-202ENST00000370817 ATF7IPQ6VMQ6 1270 aa10.29□□□□□ -0.76
COL21A1-202ENST00000370817 GRAPLQ8TC17 118 aaPredicted RBP10.29□□□□□ -0.76
COL21A1-202ENST00000370817 RPGRQ92834 1020 aaKnown RBP10.29□□□□□ -0.76
COL21A1-202ENST00000370817 USP44Q9H0E7 712 aa10.29□□□□□ -0.76
COL21A1-202ENST00000370817 A0A1W2PNR3 127 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 C21orf2O43822 256 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 HSP90B1P14625 803 aaKnown RBP10.28□□□□□ -0.76
COL21A1-202ENST00000370817 HOXB4P17483 251 aaPredicted RBP10.28□□□□□ -0.76
COL21A1-202ENST00000370817 CCT4P50991 539 aaKnown RBP10.28□□□□□ -0.76
COL21A1-202ENST00000370817 GTF2IP78347 998 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 NCOA4Q13772 614 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 EPHA10Q5JZY3 1008 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 OLFM4Q6UX06 510 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 CELF1Q92879 486 aaKnown RBP10.28□□□□□ -0.76
COL21A1-202ENST00000370817 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 RRAGCQ9HB90 399 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 MKL2Q9ULH7 1088 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
COL21A1-202ENST00000370817 ARAP2Q8WZ64 1704 aa10.27□□□□□ -0.76
COL21A1-202ENST00000370817 DCDC2BA2VCK2 349 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 MSTNO14793 375 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 ATXN7O15265 892 aaPredicted RBP10.27□□□□□ -0.77
COL21A1-202ENST00000370817 BBOX1O75936 387 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 RABL6Q3YEC7 729 aaPredicted RBP10.27□□□□□ -0.77
COL21A1-202ENST00000370817 CCDC152Q4G0S7 254 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 ARSJQ5FYB0 599 aaPredicted RBP10.27□□□□□ -0.77
COL21A1-202ENST00000370817 SOGA3Q5TF21 947 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 DDX46Q7L014 1031 aaKnown RBP10.27□□□□□ -0.77
COL21A1-202ENST00000370817 SUCLG2Q96I99 432 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 SPOCK3Q9BQ16 436 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 GREM2Q9H772 168 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 SEC31BQ9NQW1 1179 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 ZDHHC3Q9NYG2 299 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 ATP6V0A2Q9Y487 856 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 WDR90Q96KV7 1748 aa10.27□□□□□ -0.77
COL21A1-202ENST00000370817 IPO8O15397 1037 aaKnown RBP10.26□□□□□ -0.77
COL21A1-202ENST00000370817 ARAFP10398 606 aa10.26□□□□□ -0.77
COL21A1-202ENST00000370817 RLBP1P12271 317 aa10.26□□□□□ -0.77
COL21A1-202ENST00000370817 PDIA4P13667 645 aaKnown RBP10.26□□□□□ -0.77
COL21A1-202ENST00000370817 TNP2Q05952 138 aa10.26□□□□□ -0.77
COL21A1-202ENST00000370817 CCDC93Q567U6 631 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms