RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 IRF5Q13568 498 aa16.07■□□□□ 0.16
RPF1-201ENST00000370654 RHPN1Q8TCX5 695 aa16.07■□□□□ 0.16
RPF1-201ENST00000370654 P2RX7Q99572 595 aaKnown RBP16.07■□□□□ 0.16
RPF1-201ENST00000370654 GJD2Q9UKL4 321 aa16.07■□□□□ 0.16
RPF1-201ENST00000370654 PNMA3Q9UL41 463 aa16.07■□□□□ 0.16
RPF1-201ENST00000370654 ZBTB21Q9ULJ3 1066 aa16.07■□□□□ 0.16
RPF1-201ENST00000370654 APBB1O00213 710 aa16.06■□□□□ 0.16
RPF1-201ENST00000370654 CRACR2BQ8N4Y2 399 aaPredicted RBP16.06■□□□□ 0.16
RPF1-201ENST00000370654 PXYLP1Q8TE99 480 aa16.06■□□□□ 0.16
RPF1-201ENST00000370654 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
RPF1-201ENST00000370654 TBC1D2Q9BYX2 928 aa16.06■□□□□ 0.16
RPF1-201ENST00000370654 AS3MTQ9HBK9 375 aa16.06■□□□□ 0.16
RPF1-201ENST00000370654 EMILIN3Q9NT22 766 aa16.06■□□□□ 0.16
RPF1-201ENST00000370654 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
RPF1-201ENST00000370654 PLXNB2O15031 1838 aa16.06■□□□□ 0.16
RPF1-201ENST00000370654 MYH1P12882 1939 aa16.05■□□□□ 0.16
RPF1-201ENST00000370654 SGPL1O95470 568 aa16.05■□□□□ 0.16
RPF1-201ENST00000370654 ASNSP08243 561 aa16.05■□□□□ 0.16
RPF1-201ENST00000370654 Q3C1V9 767 aa16.05■□□□□ 0.16
RPF1-201ENST00000370654 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
RPF1-201ENST00000370654 COA7Q96BR5 231 aa16.05■□□□□ 0.16
RPF1-201ENST00000370654 EDC3Q96F86 508 aaKnown RBP16.05■□□□□ 0.16
RPF1-201ENST00000370654 RIOK1Q9BRS2 568 aaKnown RBP16.05■□□□□ 0.16
RPF1-201ENST00000370654 GH2P01242 217 aa16.04■□□□□ 0.16
RPF1-201ENST00000370654 HOXA7P31268 230 aaPredicted RBP16.04■□□□□ 0.16
RPF1-201ENST00000370654 USP5P45974 858 aa16.04■□□□□ 0.16
RPF1-201ENST00000370654 GCLCP48506 637 aaPredicted RBP16.04■□□□□ 0.16
RPF1-201ENST00000370654 FXR1P51114 621 aaKnown RBP eCLIP16.04■□□□□ 0.16
RPF1-201ENST00000370654 PLCD1P51178 756 aa16.04■□□□□ 0.16
RPF1-201ENST00000370654 NKX2-3Q8TAU0 364 aa16.04■□□□□ 0.16
RPF1-201ENST00000370654 DPF3Q92784 378 aa16.04■□□□□ 0.16
RPF1-201ENST00000370654 DEFB118Q96PH6 123 aa16.04■□□□□ 0.16
RPF1-201ENST00000370654 BCL11AQ9H165 835 aa16.04■□□□□ 0.16
RPF1-201ENST00000370654 RBPJLQ9UBG7 517 aa16.04■□□□□ 0.16
RPF1-201ENST00000370654 MORF4L1Q9UBU8 362 aa16.04■□□□□ 0.16
RPF1-201ENST00000370654 USP17L10C9JJH3 530 aa16.03■□□□□ 0.16
RPF1-201ENST00000370654 CHGBP05060 677 aa16.03■□□□□ 0.16
RPF1-201ENST00000370654 TATDN1Q6P1N9 297 aa16.03■□□□□ 0.16
RPF1-201ENST00000370654 ERC1Q8IUD2 1116 aa16.03■□□□□ 0.16
RPF1-201ENST00000370654 TRIM34Q9BYJ4 488 aa16.03■□□□□ 0.16
RPF1-201ENST00000370654 PAK6Q9NQU5 681 aaPredicted RBP16.03■□□□□ 0.16
RPF1-201ENST00000370654 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
RPF1-201ENST00000370654 FARP2O94887 1054 aaPredicted RBP16.02■□□□□ 0.16
RPF1-201ENST00000370654 HLA-DOAP06340 250 aa16.02■□□□□ 0.16
RPF1-201ENST00000370654 GUCY1A2P33402 732 aa16.02■□□□□ 0.16
RPF1-201ENST00000370654 HERVK_113P62684 666 aa16.02■□□□□ 0.16
RPF1-201ENST00000370654 IRX3P78415 501 aaPredicted RBP16.02■□□□□ 0.16
RPF1-201ENST00000370654 MAP3K12Q12852 859 aa16.02■□□□□ 0.16
RPF1-201ENST00000370654 PABPC4Q13310 644 aaKnown RBP eCLIP16.02■□□□□ 0.162e-10■■■■□ 21.2
RPF1-201ENST00000370654 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.16
RPF1-201ENST00000370654 C20orf194Q5TEA3 1177 aa16.02■□□□□ 0.16
RPF1-201ENST00000370654 ACER1Q8TDN7 264 aa16.02■□□□□ 0.16
RPF1-201ENST00000370654 DIS3LQ8TF46 1054 aaKnown RBP16.02■□□□□ 0.16
RPF1-201ENST00000370654 TMOD4Q9NZQ9 345 aa16.02■□□□□ 0.16
RPF1-201ENST00000370654 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.15
RPF1-201ENST00000370654 CEP290O15078 2479 aa16.02■□□□□ 0.15
RPF1-201ENST00000370654 TCRBV5S4A2TA0A5A2 114 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 C19orf81C9J6K1 198 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 SMIM22K7EJ46 135 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 IGSF3O75054 1194 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 PDE6AP16499 860 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 SHMT1P34896 483 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 CHRDL2Q6WN34 429 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 TRIB2Q92519 343 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 CRISPLD2Q9H0B8 497 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 PORCNQ9H237 461 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 SERPINB13Q9UIV8 391 aa16.01■□□□□ 0.15
RPF1-201ENST00000370654 GOLIM4O00461 696 aa16■□□□□ 0.15
RPF1-201ENST00000370654 CNMDO75829 334 aa16■□□□□ 0.15
RPF1-201ENST00000370654 TFRCP02786 760 aaKnown RBP16■□□□□ 0.15
RPF1-201ENST00000370654 CYP2D6P10635 497 aa16■□□□□ 0.15
RPF1-201ENST00000370654 CYP2B6P20813 491 aa16■□□□□ 0.15
RPF1-201ENST00000370654 SLC9C2Q5TAH2 1124 aa16■□□□□ 0.15
RPF1-201ENST00000370654 DNAJC2Q99543 621 aaKnown RBP16■□□□□ 0.15
RPF1-201ENST00000370654 XRN2Q9H0D6 950 aaKnown RBP eCLIP16■□□□□ 0.15
RPF1-201ENST00000370654 EHD4Q9H223 541 aa16■□□□□ 0.15
RPF1-201ENST00000370654 PCDH10Q9P2E7 1040 aa16■□□□□ 0.15
RPF1-201ENST00000370654 ZNF532Q9HCE3 1301 aa16■□□□□ 0.15
RPF1-201ENST00000370654 MAGEB6P1A0A0J9YX57 407 aa16■□□□□ 0.15
RPF1-201ENST00000370654 MNX1P50219 401 aaPredicted RBP16■□□□□ 0.15
RPF1-201ENST00000370654 RAB3GAP1Q15042 981 aa16■□□□□ 0.15
RPF1-201ENST00000370654 USP17L2Q6R6M4 530 aa16■□□□□ 0.15
RPF1-201ENST00000370654 RPAP2Q8IXW5 612 aaPredicted RBP16■□□□□ 0.15
RPF1-201ENST00000370654 LCORLQ8N3X6 602 aa16■□□□□ 0.15
RPF1-201ENST00000370654 GPRC5AQ8NFJ5 357 aa16■□□□□ 0.15
RPF1-201ENST00000370654 SDR42E1Q8WUS8 393 aa16■□□□□ 0.15
RPF1-201ENST00000370654 KIF1BPQ96EK5 621 aa16■□□□□ 0.15
RPF1-201ENST00000370654 PAGR1Q9BTK6 254 aa16■□□□□ 0.15
RPF1-201ENST00000370654 GINM1Q9NU53 330 aa16■□□□□ 0.15
RPF1-201ENST00000370654 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
RPF1-201ENST00000370654 ALPK3Q96L96 1907 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 PRKAB2O43741 272 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 HMGCRP04035 888 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 ERVK-9P63128 1117 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 ERVK-24P63145 666 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 GABPAQ06546 454 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 CCL14Q16627 93 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 CERKLQ49MI3 558 aaPredicted RBP15.99■□□□□ 0.15
RPF1-201ENST00000370654 HSP90AB4PQ58FF6 505 aa15.99■□□□□ 0.15
RPF1-201ENST00000370654 CLASRPQ8N2M8 674 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms