RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 ZSCAN10Q96SZ4 725 aaPredicted RBP13.21□□□□□ -0.29
RAB39B-201ENST00000369454 RIOK1Q9BRS2 568 aaKnown RBP13.21□□□□□ -0.29
RAB39B-201ENST00000369454 CSRNP2Q9H175 543 aa13.21□□□□□ -0.29
RAB39B-201ENST00000369454 EP400Q96L91 3159 aa13.21□□□□□ -0.3
RAB39B-201ENST00000369454 WNT7AO00755 349 aa13.21□□□□□ -0.3
RAB39B-201ENST00000369454 ZNF174Q15697 407 aa13.21□□□□□ -0.3
RAB39B-201ENST00000369454 CREBRFQ8IUR6 639 aa13.21□□□□□ -0.3
RAB39B-201ENST00000369454 NHSL1Q5SYE7 1610 aa13.21□□□□□ -0.3
RAB39B-201ENST00000369454 MECOMQ03112 1051 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 CATIPQ7Z7H3 387 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 IQCA1Q86XH1 822 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 CCAR2Q8N163 923 aaKnown RBP13.2□□□□□ -0.3
RAB39B-201ENST00000369454 NGLY1Q96IV0 654 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 HSD3B7Q9H2F3 369 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 C4AP0C0L4 1744 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 C4BP0C0L5 1744 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
RAB39B-201ENST00000369454 STX17P56962 302 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 HOMER1Q86YM7 354 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 SETDB2Q96T68 719 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
RAB39B-201ENST00000369454 COL1A1P02452 1464 aaPredicted RBP13.2□□□□□ -0.3
RAB39B-201ENST00000369454 ANKRD36CQ5JPF3 1778 aa13.2□□□□□ -0.3
RAB39B-201ENST00000369454 RPS8P62241 208 aaKnown RBP13.19□□□□□ -0.3
RAB39B-201ENST00000369454 POSTNQ15063 836 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 CTR9Q6PD62 1173 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
RAB39B-201ENST00000369454 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
RAB39B-201ENST00000369454 NEMFO60524 1076 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 GSDMDP57764 484 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 AMIGO3Q86WK7 504 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 SMYD4Q8IYR2 804 aaPredicted RBP13.19□□□□□ -0.3
RAB39B-201ENST00000369454 TMTC2Q8N394 836 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 NLRP3Q96P20 1036 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
RAB39B-201ENST00000369454 TUBE1Q9UJT0 475 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 NCBP1Q09161 790 aaKnown RBP13.19□□□□□ -0.3
RAB39B-201ENST00000369454 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 SEC23AQ15436 765 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
RAB39B-201ENST00000369454 SYT10Q6XYQ8 523 aa13.19□□□□□ -0.3
RAB39B-201ENST00000369454 ZPR1O75312 459 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 FMR1Q06787 632 aaKnown RBP eCLIP13.18□□□□□ -0.3
RAB39B-201ENST00000369454 TIGD1Q96MW7 591 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 MAN1B1Q9UKM7 699 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
RAB39B-201ENST00000369454 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 STK36Q9NRP7 1315 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 TSPY2A6NKD2 308 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 HIBADHP31937 336 aaKnown RBP13.18□□□□□ -0.3
RAB39B-201ENST00000369454 SMARCC1Q92922 1105 aaPredicted RBP13.18□□□□□ -0.3
RAB39B-201ENST00000369454 SMARCE1Q969G3 411 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 NFE2L3Q9Y4A8 694 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 COL14A1Q05707 1796 aaKnown RBP13.18□□□□□ -0.3
RAB39B-201ENST00000369454 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 TOP1P11387 765 aaKnown RBP13.18□□□□□ -0.3
RAB39B-201ENST00000369454 PTPREP23469 700 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 CDC25AP30304 524 aa13.18□□□□□ -0.3
RAB39B-201ENST00000369454 FOXP1Q9H334 677 aaPredicted RBP13.18□□□□□ -0.3
RAB39B-201ENST00000369454 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 USP17L8P0C7I0 530 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 XBP1P17861 261 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 PKN1Q16512 942 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 MTERF4Q7Z6M4 381 aaKnown RBP13.17□□□□□ -0.3
RAB39B-201ENST00000369454 NSUN4Q96CB9 384 aaKnown RBP13.17□□□□□ -0.3
RAB39B-201ENST00000369454 BPIFA3Q9BQP9 254 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
RAB39B-201ENST00000369454 ADAMTS3O15072 1205 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
RAB39B-201ENST00000369454 SAMSN1Q9NSI8 373 aaKnown RBP13.17□□□□□ -0.3
RAB39B-201ENST00000369454 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 ZNF804BA4D1E1 1349 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 KRT2P35908 639 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 DZIP1Q86YF9 867 aaKnown RBP13.17□□□□□ -0.3
RAB39B-201ENST00000369454 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
RAB39B-201ENST00000369454 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
RAB39B-201ENST00000369454 A0A087X0B3 334 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 ADKP55263 362 aaKnown RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 SF3B3Q15393 1217 aaKnown RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 DIXDC1Q155Q3 683 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 PPP1R13BQ96KQ4 1090 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 CCDC94Q9BW85 323 aaPredicted RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 IKBKBO14920 756 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 NRDCO43847 1150 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 MCM7P33993 719 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 CLEC4GQ6UXB4 293 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 SRBD1Q8N5C6 995 aaKnown RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 CTCFLQ8NI51 663 aaPredicted RBP13.16□□□□□ -0.3
RAB39B-201ENST00000369454 KIF18AQ8NI77 898 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 RASGRP4Q8TDF6 673 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 CPLX3Q8WVH0 158 aa13.16□□□□□ -0.3
RAB39B-201ENST00000369454 GPKOWQ92917 476 aaPredicted RBP eCLIP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms