RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 SASH3O75995 380 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 THOC1Q96FV9 657 aaKnown RBP17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 ZC3H12CQ9C0D7 883 aaKnown RBP17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 ZRANB2O95218 330 aaKnown RBP eCLIP17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 CCDC144BQ3MJ40 725 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 ANO6Q4KMQ2 910 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 NLGN1Q8N2Q7 840 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 DBNDD1Q9H9R9 158 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 PRDM16Q9HAZ2 1276 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 SPATS2LQ9NUQ6 558 aaKnown RBP17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 USP54Q70EL1 1684 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 MAST3O60307 1309 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 NRDCO43847 1150 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 NAP1L1P55209 391 aaKnown RBP17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 NUP133Q8WUM0 1156 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 MXD3Q9BW11 206 aa17.51■□□□□ 0.39
SEMA6C-202ENST00000368912 PRDX5P30044 214 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 CLNS1AP54105 237 aaKnown RBP17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 GTF2IP78347 998 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 PICALMQ13492 652 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 RBM17Q96I25 401 aaKnown RBP17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 R3HDM1Q15032 1099 aaKnown RBP17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 MAP3K11Q16584 847 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 IMMTQ16891 758 aaKnown RBP17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 HSPD1P10809 573 aaKnown RBP17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 SCNN1DP51172 638 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 NAA25Q14CX7 972 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 SLC27A3Q5K4L6 730 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 LRRC8AQ8IWT6 810 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 FAM107BQ9H098 131 aa17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 SAP30BPQ9UHR5 308 aaKnown RBP17.5■□□□□ 0.39
SEMA6C-202ENST00000368912 RANBP6O60518 1105 aaKnown RBP17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 PSMA5P28066 241 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 TEX11Q8IYF3 940 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 IQUBQ8NA54 791 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 BORCS6Q96GS4 357 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 NCOA5Q9HCD5 579 aaKnown RBP17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 ODF2LQ9ULJ1 636 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 PLCH1Q4KWH8 1693 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 AOX1Q06278 1338 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 TBC1D8O95759 1140 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 HSPA4P34932 840 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 TYRO3Q06418 890 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 APOBRQ0VD83 1088 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 Q6ZUG5 572 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 FBXO41Q8TF61 875 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 PDE11AQ9HCR9 933 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 BSDC1Q9NW68 430 aaPredicted RBP17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 GGA1Q9UJY5 639 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 AP1G2O75843 785 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 CYP21A2P08686 494 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 PLA2G12BQ9BX93 195 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 PSD3Q9NYI0 1048 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 DENND2AQ9ULE3 1009 aa17.49■□□□□ 0.39
SEMA6C-202ENST00000368912 USP5P45974 858 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 CEP57Q86XR8 500 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 MYL10Q9BUA6 226 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 CBX8Q9HC52 389 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 ETAA1Q9NY74 926 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 FGAP02671 866 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 DPP8Q6V1X1 898 aaPredicted RBP17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 ARMCX6Q7L4S7 300 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 NUP62CLQ9H1M0 184 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 ABCA3Q99758 1704 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 DOT1LQ8TEK3 1739 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 BECN2A8MW95 431 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 CPLX1O14810 134 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 ONECUT3O60422 494 aaPredicted RBP17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 ZC3H12AQ5D1E8 599 aaKnown RBP17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 RABEP2Q9H5N1 569 aa17.48■□□□□ 0.39
SEMA6C-202ENST00000368912 B4E1Z4 1266 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 H0YIN7 160 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 C21orf2O43822 256 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 GPSM2P81274 684 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 CC2D1AQ6P1N0 951 aaPredicted RBP17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 FAM84BQ96KN1 310 aaPredicted RBP17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 FAN1Q9Y2M0 1017 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 ELP1O95163 1332 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 CTAGE5O15320 804 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 LARGE1O95461 756 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 ERCC3P19447 782 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 ZSWIM4Q9H7M6 989 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 CARMIL3Q8ND23 1372 aa17.47■□□□□ 0.39
SEMA6C-202ENST00000368912 ATP8B1O43520 1251 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 SKAP2O75563 359 aaPredicted RBP17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 ZNF165P49910 485 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 SCRN1Q12765 414 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 TTF1Q15361 905 aaPredicted RBP17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 APPBP2Q92624 585 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 TNMDQ9H2S6 317 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 H3BQF6 201 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 NEMFO60524 1076 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 NYAP1Q6ZVC0 841 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 ZSCAN29Q8IWY8 852 aaPredicted RBP17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 FAXDC2Q96IV6 333 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 H3BQV1 296 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 SMIM22K7EJ46 135 aa17.46■□□□□ 0.39
SEMA6C-202ENST00000368912 EIF3JO75822 258 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms