RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 APTXQ7Z2E3 356 aaKnown RBP11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 CNGA4Q8IV77 575 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 TEX2Q8IWB9 1127 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 GJB4Q9NTQ9 266 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 SHOX2O60902 331 aaPredicted RBP11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 RNF40O75150 1001 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 RXRBP28702 533 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 CPLX2Q6PUV4 134 aaKnown RBP11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 SLC35F6Q8N357 371 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 CLIC6Q96NY7 704 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 CTAGE1Q96RT6 745 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 CARD10Q9BWT7 1032 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 SUGCTQ9HAC7 445 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 MYH8P13535 1937 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 STK36Q9NRP7 1315 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 LRRIQ3A6PVS8 624 aaPredicted RBP11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 FOXP2O15409 715 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 AMPD2Q01433 879 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 MCTP2Q6DN12 878 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 RALYLQ86SE5 291 aaKnown RBP11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 SPATA20Q8TB22 786 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 CEP89Q96ST8 783 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 STRN4Q9NRL3 753 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 ABCC12Q96J65 1359 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 TJP1Q07157 1748 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 RHOXF2BP0C7M4 288 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 ATG9AQ7Z3C6 839 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 TMTC1Q8IUR5 882 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 IGSF22Q8N9C0 903 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 RHOXF2Q9BQY4 288 aa11.94□□□□□ -0.5
LYSMD1-201ENST00000368908 TARSL2A2RTX5 802 aaKnown RBP11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 IL15P40933 162 aaPredicted RBP11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 RBL2Q08999 1139 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 SF3B2Q13435 895 aaKnown RBP11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 SPATA1Q5VX52 437 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 COPS6Q7L5N1 327 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 UBE3BQ7Z3V4 1068 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 CCDC148Q8NFR7 591 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 OSBP2Q969R2 916 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 ZFP91Q96JP5 570 aaPredicted RBP11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 MED15Q96RN5 788 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 ADD3Q9UEY8 706 aaKnown RBP11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 WWC3Q9ULE0 1092 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 FOXN1O15353 648 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 ONECUT3O60422 494 aaPredicted RBP11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 SYF2O95926 243 aaKnown RBP11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 CSB-PGBD3P0DP91 1061 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 PTPREP23469 700 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 USP14P54578 494 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 TRIM29Q14134 588 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 CDKAL1Q5VV42 579 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 SAMSN1Q9NSI8 373 aaKnown RBP11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 HPCAL4Q9UM19 191 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 MYO6Q9UM54 1294 aa11.93□□□□□ -0.5
LYSMD1-201ENST00000368908 CDHR2Q9BYE9 1310 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 ZC3H4Q9UPT8 1303 aaKnown RBP11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 METAP2P50579 478 aaKnown RBP eCLIP11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 TRDNQ13061 729 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 FILIP1LQ4L180 1135 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 WWC2Q6AWC2 1192 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 TOM1L2Q6ZVM7 507 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 CCDC91Q7Z6B0 441 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 TRMT44Q8IYL2 757 aaKnown RBP11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 RPGRIP1Q96KN7 1286 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 CDCA7Q9BWT1 371 aaPredicted RBP11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 FBXO2Q9UK22 296 aaPredicted RBP11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 ANGEL1Q9UNK9 670 aaKnown RBP11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 DISP2A7MBM2 1401 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 NUP188Q5SRE5 1749 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 FGAP02671 866 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 ARHGAP25P42331 645 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 MMP14P50281 582 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 TRIM14Q14142 442 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 HSP90AA4PQ58FG1 418 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 SLC9C2Q5TAH2 1124 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 STK11IPQ8N1F8 1099 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 NEUROD6Q96NK8 337 aa11.92□□□□□ -0.5
LYSMD1-201ENST00000368908 TEX33O43247 280 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 ACTN4O43707 911 aaKnown RBP11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 CIAO1O76071 339 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 NOA1Q8NC60 698 aaKnown RBP11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 APPBP2Q92624 585 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 DRC1Q96MC2 740 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 SERTAD1Q9UHV2 236 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 NID2Q14112 1375 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 ATXN2Q99700 1313 aaKnown RBP11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 SYNRGQ9UMZ2 1314 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 A0A087WZG4 1122 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 A0A0U1RQJ8 604 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 SH2B2O14492 632 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms