RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 IRF5Q13568 498 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 RRP1BQ14684 758 aaKnown RBP12.01□□□□□ -0.49
TPM3-210ENST00000368530 GADL1Q6ZQY3 521 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 AACSQ86V21 672 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 ZSCAN29Q8IWY8 852 aaPredicted RBP12.01□□□□□ -0.49
TPM3-210ENST00000368530 DPF3Q92784 378 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 RILPL2Q969X0 211 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 HMG20BQ9P0W2 317 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 PHIPQ8WWQ0 1821 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 TRIM75PA6NK02 468 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 FAM196BA6NMK8 535 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
TPM3-210ENST00000368530 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 PICALMQ13492 652 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 TREML2Q5T2D2 321 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 PI16Q6UXB8 463 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 DZIP1Q86YF9 867 aaKnown RBP12.01□□□□□ -0.49
TPM3-210ENST00000368530 NSUN4Q96CB9 384 aaKnown RBP12.01□□□□□ -0.49
TPM3-210ENST00000368530 BIN2Q9UBW5 565 aaPredicted RBP12.01□□□□□ -0.49
TPM3-210ENST00000368530 AGTPBP1Q9UPW5 1226 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
TPM3-210ENST00000368530 INHAP05111 366 aa12□□□□□ -0.49
TPM3-210ENST00000368530 SPTY2D1Q68D10 685 aaPredicted RBP12□□□□□ -0.49
TPM3-210ENST00000368530 CASC1Q6TDU7 716 aa12□□□□□ -0.49
TPM3-210ENST00000368530 SLF2Q8IX21 1173 aa12□□□□□ -0.49
TPM3-210ENST00000368530 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
TPM3-210ENST00000368530 CCDC8Q9H0W5 538 aaPredicted RBP12□□□□□ -0.49
TPM3-210ENST00000368530 PAK6Q9NQU5 681 aaPredicted RBP12□□□□□ -0.49
TPM3-210ENST00000368530 DOCK2Q92608 1830 aa12□□□□□ -0.49
TPM3-210ENST00000368530 MGAMO43451 1857 aa11.99□□□□□ -0.49
TPM3-210ENST00000368530 ANKRD13CQ8N6S4 541 aa11.99□□□□□ -0.49
TPM3-210ENST00000368530 PI4K2BQ8TCG2 481 aa11.99□□□□□ -0.49
TPM3-210ENST00000368530 HTATIP2Q9BUP3 242 aa11.99□□□□□ -0.49
TPM3-210ENST00000368530 GJD2Q9UKL4 321 aa11.99□□□□□ -0.49
TPM3-210ENST00000368530 AKAP2Q9Y2D5 859 aa11.99□□□□□ -0.49
TPM3-210ENST00000368530 PTPRFP10586 1907 aa11.99□□□□□ -0.49
TPM3-210ENST00000368530 COL2A1P02458 1487 aaPredicted RBP11.98□□□□□ -0.49
TPM3-210ENST00000368530 TNPO2O14787 897 aaKnown RBP11.98□□□□□ -0.49
TPM3-210ENST00000368530 FARP2O94887 1054 aaPredicted RBP11.98□□□□□ -0.49
TPM3-210ENST00000368530 ARID4AP29374 1257 aaPredicted RBP11.98□□□□□ -0.49
TPM3-210ENST00000368530 SPP2Q13103 211 aa11.98□□□□□ -0.49
TPM3-210ENST00000368530 FAM110CQ1W6H9 321 aa11.98□□□□□ -0.49
TPM3-210ENST00000368530 SPATA5Q8NB90 893 aa11.98□□□□□ -0.49
TPM3-210ENST00000368530 PROCA1Q8NCQ7 364 aaPredicted RBP11.98□□□□□ -0.49
TPM3-210ENST00000368530 EAF2Q96CJ1 260 aaPredicted RBP11.98□□□□□ -0.49
TPM3-210ENST00000368530 GPATCH3Q96I76 525 aa11.98□□□□□ -0.49
TPM3-210ENST00000368530 DEFB118Q96PH6 123 aa11.98□□□□□ -0.49
TPM3-210ENST00000368530 OSBPL5Q9H0X9 879 aaPredicted RBP11.98□□□□□ -0.49
TPM3-210ENST00000368530 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.98□□□□□ -0.49
TPM3-210ENST00000368530 TLR7Q9NYK1 1049 aaKnown RBP11.98□□□□□ -0.49
TPM3-210ENST00000368530 DAXXQ9UER7 740 aaPredicted RBP11.98□□□□□ -0.49
TPM3-210ENST00000368530 DOCK1Q14185 1865 aa11.97□□□□□ -0.49
TPM3-210ENST00000368530 CAP2P40123 477 aa11.97□□□□□ -0.49
TPM3-210ENST00000368530 MCAMP43121 646 aa11.97□□□□□ -0.49
TPM3-210ENST00000368530 JAG1P78504 1218 aa11.97□□□□□ -0.49
TPM3-210ENST00000368530 SH3D19Q5HYK7 790 aa11.97□□□□□ -0.49
TPM3-210ENST00000368530 ZNF280CQ8ND82 737 aa11.97□□□□□ -0.49
TPM3-210ENST00000368530 SMCR8Q8TEV9 937 aaPredicted RBP11.97□□□□□ -0.49
TPM3-210ENST00000368530 ECHDC1Q9NTX5 307 aa11.97□□□□□ -0.49
TPM3-210ENST00000368530 ERC2O15083 957 aa11.96□□□□□ -0.49
TPM3-210ENST00000368530 LDHCP07864 332 aa11.96□□□□□ -0.49
TPM3-210ENST00000368530 CAPN2P17655 700 aa11.96□□□□□ -0.49
TPM3-210ENST00000368530 MNX1P50219 401 aaPredicted RBP11.96□□□□□ -0.49
TPM3-210ENST00000368530 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.49
TPM3-210ENST00000368530 NR2E3Q9Y5X4 410 aa11.96□□□□□ -0.49
TPM3-210ENST00000368530 TTC41PQ6P2S7 1318 aa11.96□□□□□ -0.49
TPM3-210ENST00000368530 GLRX3O76003 335 aaKnown RBP11.96□□□□□ -0.5
TPM3-210ENST00000368530 TFRCP02786 760 aaKnown RBP11.96□□□□□ -0.5
TPM3-210ENST00000368530 HMGCS2P54868 508 aa11.96□□□□□ -0.5
TPM3-210ENST00000368530 METTL16Q86W50 562 aaKnown RBP11.96□□□□□ -0.5
TPM3-210ENST00000368530 COA7Q96BR5 231 aa11.96□□□□□ -0.5
TPM3-210ENST00000368530 PAWRQ96IZ0 340 aaKnown RBP11.96□□□□□ -0.5
TPM3-210ENST00000368530 ASCC2Q9H1I8 757 aaPredicted RBP11.96□□□□□ -0.5
TPM3-210ENST00000368530 LAMA3Q16787 3333 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 DOCK3Q8IZD9 2030 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 USP17L5A8MUK1 530 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 CHMLP26374 656 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 GCLCP48506 637 aaPredicted RBP11.95□□□□□ -0.5
TPM3-210ENST00000368530 PPP4CP60510 307 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 GSTO1P78417 241 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 TRIM32Q13049 653 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 TNNI3KQ59H18 835 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 POTEEQ6S8J3 1075 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
TPM3-210ENST00000368530 DIS3LQ8TF46 1054 aaKnown RBP11.95□□□□□ -0.5
TPM3-210ENST00000368530 WDR18Q9BV38 432 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 TBC1D2Q9BYX2 928 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 DNAJC18Q9H819 358 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 MORF4L1Q9UBU8 362 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 HERC5Q9UII4 1024 aaKnown RBP11.95□□□□□ -0.5
TPM3-210ENST00000368530 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 FPGT-TNNI3KV9GXZ4 949 aa11.95□□□□□ -0.5
TPM3-210ENST00000368530 LOC285556D6RIA3 1793 aa11.94□□□□□ -0.5
TPM3-210ENST00000368530 SOX1O00570 391 aaPredicted RBP11.94□□□□□ -0.5
TPM3-210ENST00000368530 PEX10O60683 326 aa11.94□□□□□ -0.5
TPM3-210ENST00000368530 RBM25P49756 843 aaKnown RBP11.94□□□□□ -0.5
TPM3-210ENST00000368530 SHROOM1Q2M3G4 852 aaPredicted RBP11.94□□□□□ -0.5
TPM3-210ENST00000368530 ADGRA1Q86SQ6 560 aa11.94□□□□□ -0.5
TPM3-210ENST00000368530 TEX11Q8IYF3 940 aa11.94□□□□□ -0.5
TPM3-210ENST00000368530 ESYT1Q9BSJ8 1104 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms