RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 LARP1BQ659C4 914 aaKnown RBP9.45□□□□□ -0.9
SSR2-202ENST00000368311 GREM2Q9H772 168 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 VAT1LQ9HCJ6 419 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 CD209Q9NNX6 404 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
SSR2-202ENST00000368311 XRN1Q8IZH2 1706 aaKnown RBP9.44□□□□□ -0.9
SSR2-202ENST00000368311 BCL9O00512 1426 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 TAF5LO75529 589 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 GYS1P13807 737 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 RGS2P41220 211 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 TCP10Q12799 353 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 MAPKAPK5Q8IW41 473 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 INO80BQ9C086 356 aaPredicted RBP9.44□□□□□ -0.9
SSR2-202ENST00000368311 KAT6BQ8WYB5 2073 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 USP17L10C9JJH3 530 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 STX10O60499 249 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 STRN3Q13033 797 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 SYCP3Q8IZU3 236 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 TCHPQ9BT92 498 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 ZSCAN16Q9H4T2 348 aaPredicted RBP9.44□□□□□ -0.9
SSR2-202ENST00000368311 RFX7Q2KHR2 1363 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 PXDNLA1KZ92 1463 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 STX6O43752 255 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 MSCO60682 206 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 KRT13P13646 458 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 YWHAEP62258 255 aaKnown RBP9.44□□□□□ -0.9
SSR2-202ENST00000368311 ZBTB8OSQ8IWT0 167 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 MIGA1Q8NAN2 632 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 IFT172Q9UG01 1749 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 MAPK4P31152 587 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 GMPSP49915 693 aaPredicted RBP9.44□□□□□ -0.9
SSR2-202ENST00000368311 E2F5Q15329 346 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 WRNIP1Q96S55 665 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 PLEKHF1Q96S99 279 aa9.44□□□□□ -0.9
SSR2-202ENST00000368311 DEFB115Q30KQ5 88 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 SLFN12Q8IYM2 578 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 GOLGA6L1Q8N7Z2 621 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 TRIM6Q9C030 488 aaPredicted RBP9.43□□□□□ -0.9
SSR2-202ENST00000368311 UBA7P41226 1012 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 PPP2R5AQ15172 486 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 FBXO11Q86XK2 927 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 ABI1Q8IZP0 508 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 LIMCH1Q9UPQ0 1083 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 KIF20BQ96Q89 1820 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 PRAMEF22A3QJZ6 481 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 FCER1AP12319 257 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 SLFN13Q68D06 897 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 NSMFQ6X4W1 530 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 SOCS4Q8WXH5 440 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 TTC14Q96N46 770 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 RRAGCQ9HB90 399 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 MYOZ2Q9NPC6 264 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 SLIT2O94813 1529 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 P4HA1P13674 534 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 SCNN1DP51172 638 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 SCARF1Q14162 830 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 FAM47CQ5HY64 1035 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 HOMER1Q86YM7 354 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 SPATA32Q96LK8 384 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 MTA3Q9BTC8 594 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 ABCC4O15439 1325 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 ABCB11O95342 1321 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 DISP2A7MBM2 1401 aa9.43□□□□□ -0.9
SSR2-202ENST00000368311 ONECUT3O60422 494 aaPredicted RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 CTNND1O60716 968 aaKnown RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 DEXIO95424 95 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 PPARAQ07869 468 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 PKN2Q16513 984 aaKnown RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 TTLL11Q8NHH1 800 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 FAM151AQ8WW52 585 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 SCAND2PQ9GZW5 306 aaPredicted RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 CCPG1Q9ULG6 757 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 FAM50BQ9Y247 325 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 GPSM2P81274 684 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 MIS18BP1Q6P0N0 1132 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 ZNF397Q8NF99 534 aaPredicted RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 TBC1D16Q8TBP0 767 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 ARID3AQ99856 593 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 ADPGKQ9BRR6 497 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 KDM3AQ9Y4C1 1321 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 ATP2B1P20020 1258 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 CTCFP49711 727 aaPredicted RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 PDE1AP54750 535 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 FKBP15Q5T1M5 1219 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 SLF1Q9BQI6 1058 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 MINPP1Q9UNW1 487 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 MROH7-TTC4A0A0A0MT08 1334 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 ARHGEF28Q8N1W1 1705 aaKnown RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 SMTNL1A8MU46 457 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 CTAGE5O15320 804 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 NUCB1Q02818 461 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 ERO1BQ86YB8 467 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 JARID2Q92833 1246 aaPredicted RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 AMNQ9BXJ7 453 aa9.42□□□□□ -0.9
SSR2-202ENST00000368311 TTC12Q9H892 705 aaPredicted RBP9.42□□□□□ -0.9
SSR2-202ENST00000368311 ZNF532Q9HCE3 1301 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms