RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 IGDCC4Q8TDY8 1250 aa18.67■□□□□ 0.58
LMNA-203ENST00000368297 CSRNP1Q96S65 589 aa18.67■□□□□ 0.58
LMNA-203ENST00000368297 ZSCAN10Q96SZ4 725 aaPredicted RBP18.67■□□□□ 0.58
LMNA-203ENST00000368297 MTA3Q9BTC8 594 aa18.67■□□□□ 0.58
LMNA-203ENST00000368297 SIPA1L1O43166 1804 aa18.67■□□□□ 0.58
LMNA-203ENST00000368297 KLF18A0A0U1RQI7 1052 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 GABPAQ06546 454 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 TNFAIP1Q13829 316 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 FOXP4Q8IVH2 680 aaPredicted RBP18.66■□□□□ 0.58
LMNA-203ENST00000368297 CCDC83Q8IWF9 413 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 HACL1Q9UJ83 578 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 ASTN2O75129 1339 aaPredicted RBP18.66■□□□□ 0.58
LMNA-203ENST00000368297 TNKSO95271 1327 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 DCAF8L1A6NGE4 600 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 CCDC69A6NI79 296 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 CUL4AQ13619 759 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
LMNA-203ENST00000368297 LIFRP42702 1097 aa18.65■□□□□ 0.58
LMNA-203ENST00000368297 ZNF274Q96GC6 653 aaPredicted RBP18.65■□□□□ 0.58
LMNA-203ENST00000368297 TMEM39BQ9GZU3 492 aa18.65■□□□□ 0.58
LMNA-203ENST00000368297 ADARB2Q9NS39 739 aaKnown RBP18.65■□□□□ 0.58
LMNA-203ENST00000368297 SCAF8Q9UPN6 1271 aaKnown RBP18.65■□□□□ 0.58
LMNA-203ENST00000368297 FAM196BA6NMK8 535 aa18.64■□□□□ 0.57
LMNA-203ENST00000368297 GOLGA8BA8MQT2 603 aa18.64■□□□□ 0.57
LMNA-203ENST00000368297 RASA3Q14644 834 aa18.64■□□□□ 0.57
LMNA-203ENST00000368297 ANGEL2Q5VTE6 544 aaKnown RBP18.64■□□□□ 0.57
LMNA-203ENST00000368297 SYNE3Q6ZMZ3 975 aa18.64■□□□□ 0.57
LMNA-203ENST00000368297 TMTC2Q8N394 836 aa18.64■□□□□ 0.57
LMNA-203ENST00000368297 SENP2Q9HC62 589 aa18.64■□□□□ 0.57
LMNA-203ENST00000368297 BRPF3Q9ULD4 1205 aa18.64■□□□□ 0.57
LMNA-203ENST00000368297 GLTPD2A6NH11 291 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 NMT2O60551 498 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 SLURP2P0DP57 97 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 PDIA3P30101 505 aaKnown RBP18.63■□□□□ 0.57
LMNA-203ENST00000368297 SHMT1P34896 483 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 CCDC178Q5BJE1 867 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 IFIT1BQ5T764 474 aaKnown RBP18.63■□□□□ 0.57
LMNA-203ENST00000368297 APOBEC3FQ8IUX4 373 aaKnown RBP18.63■□□□□ 0.57
LMNA-203ENST00000368297 ENAHQ8N8S7 591 aaPredicted RBP18.63■□□□□ 0.57
LMNA-203ENST00000368297 TAOK2Q9UL54 1235 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 PFKFB2O60825 505 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 EVCP57679 992 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 CCT2P78371 535 aaKnown RBP18.63■□□□□ 0.57
LMNA-203ENST00000368297 NUCB2P80303 420 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 SEC23AQ15436 765 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 SGMS1Q86VZ5 419 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 RAB11FIP4Q86YS3 637 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 NEDD1Q8NHV4 660 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 INTS4Q96HW7 963 aaKnown RBP18.63■□□□□ 0.57
LMNA-203ENST00000368297 L3MBTL3Q96JM7 780 aaPredicted RBP18.63■□□□□ 0.57
LMNA-203ENST00000368297 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.63■□□□□ 0.57
LMNA-203ENST00000368297 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
LMNA-203ENST00000368297 MPHOSPH10O00566 681 aaKnown RBP18.62■□□□□ 0.57
LMNA-203ENST00000368297 AKR1B1P15121 316 aa18.62■□□□□ 0.57
LMNA-203ENST00000368297 HIRAP54198 1017 aaPredicted RBP18.62■□□□□ 0.57
LMNA-203ENST00000368297 GTF3C6Q969F1 213 aa18.62■□□□□ 0.57
LMNA-203ENST00000368297 DNAJC18Q9H819 358 aa18.62■□□□□ 0.57
LMNA-203ENST00000368297 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.62■□□□□ 0.57
LMNA-203ENST00000368297 GGA3Q9NZ52 723 aa18.62■□□□□ 0.57
LMNA-203ENST00000368297 HERC5Q9UII4 1024 aaKnown RBP18.62■□□□□ 0.57
LMNA-203ENST00000368297 ZBTB43O43298 467 aa18.61■□□□□ 0.57
LMNA-203ENST00000368297 APOA5Q6Q788 366 aa18.61■□□□□ 0.57
LMNA-203ENST00000368297 CCDC17Q96LX7 622 aa18.61■□□□□ 0.57
LMNA-203ENST00000368297 TCP11L1Q9NUJ3 509 aa18.61■□□□□ 0.57
LMNA-203ENST00000368297 ST3GAL1Q11201 340 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 SCRN1Q12765 414 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 RAB3GAP1Q15042 981 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 CERKLQ49MI3 558 aaPredicted RBP18.6■□□□□ 0.57
LMNA-203ENST00000368297 METTL16Q86W50 562 aaKnown RBP18.6■□□□□ 0.57
LMNA-203ENST00000368297 MICU3Q86XE3 530 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 CDAN1Q8IWY9 1227 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 CHMP4CQ96CF2 233 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 MYL10Q9BUA6 226 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 DEFB129Q9H1M3 183 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 IL17RBQ9NRM6 502 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 SMC3Q9UQE7 1217 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 GOLGA8AA7E2F4 631 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 METAP2P50579 478 aaKnown RBP eCLIP18.6■□□□□ 0.57
LMNA-203ENST00000368297 TATDN1Q6P1N9 297 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 CATIPQ7Z7H3 387 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 ZNF654Q8IZM8 581 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 KAT14Q9H8E8 782 aa18.6■□□□□ 0.57
LMNA-203ENST00000368297 NCOA5Q9HCD5 579 aaKnown RBP18.6■□□□□ 0.57
LMNA-203ENST00000368297 PLIN4Q96Q06 1357 aa18.59■□□□□ 0.57
LMNA-203ENST00000368297 RXRAP19793 462 aa18.59■□□□□ 0.57
LMNA-203ENST00000368297 EPHX2P34913 555 aa18.59■□□□□ 0.57
LMNA-203ENST00000368297 DGKHQ86XP1 1220 aa18.59■□□□□ 0.57
LMNA-203ENST00000368297 CCDC144CPQ8IYA2 1237 aa18.59■□□□□ 0.57
LMNA-203ENST00000368297 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
LMNA-203ENST00000368297 GBP4Q96PP9 640 aa18.59■□□□□ 0.57
LMNA-203ENST00000368297 STX8Q9UNK0 236 aa18.59■□□□□ 0.57
LMNA-203ENST00000368297 HPS5Q9UPZ3 1129 aa18.59■□□□□ 0.57
LMNA-203ENST00000368297 IQCA1LA6NCM1 817 aa18.58■□□□□ 0.57
LMNA-203ENST00000368297 USP50Q70EL3 339 aaPredicted RBP18.58■□□□□ 0.57
LMNA-203ENST00000368297 MIGA2Q7L4E1 593 aa18.58■□□□□ 0.57
LMNA-203ENST00000368297 PGAP2Q9UHJ9 254 aa18.58■□□□□ 0.57
LMNA-203ENST00000368297 SCN4AP35499 1836 aa18.58■□□□□ 0.56
LMNA-203ENST00000368297 PITPNM2Q9BZ72 1349 aa18.58■□□□□ 0.56
LMNA-203ENST00000368297 DHX16O60231 1041 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms