RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
CD48-202ENST00000368046 SAP30BPQ9UHR5 308 aaKnown RBP11.89□□□□□ -0.51
CD48-202ENST00000368046 AFG3L2Q9Y4W6 797 aa11.89□□□□□ -0.51
CD48-202ENST00000368046 SALL3Q9BXA9 1300 aa11.88□□□□□ -0.51
CD48-202ENST00000368046 FAM196BA6NMK8 535 aa11.88□□□□□ -0.51
CD48-202ENST00000368046 RNF113AO15541 343 aaKnown RBP11.88□□□□□ -0.51
CD48-202ENST00000368046 ZFYP08048 801 aaPredicted RBP11.88□□□□□ -0.51
CD48-202ENST00000368046 RRP1BQ14684 758 aaKnown RBP11.88□□□□□ -0.51
CD48-202ENST00000368046 SLFNL1Q499Z3 407 aa11.88□□□□□ -0.51
CD48-202ENST00000368046 B4GALNT3Q6L9W6 998 aa11.88□□□□□ -0.51
CD48-202ENST00000368046 LCORLQ8N3X6 602 aa11.88□□□□□ -0.51
CD48-202ENST00000368046 ZNF296Q8WUU4 475 aaPredicted RBP11.88□□□□□ -0.51
CD48-202ENST00000368046 PUS7LQ9H0K6 701 aaKnown RBP11.88□□□□□ -0.51
CD48-202ENST00000368046 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
CD48-202ENST00000368046 ARMT1Q9H993 441 aa11.88□□□□□ -0.51
CD48-202ENST00000368046 ZCCHC17Q9NP64 241 aaKnown RBP11.88□□□□□ -0.51
CD48-202ENST00000368046 DCP1AQ9NPI6 582 aaPredicted RBP11.88□□□□□ -0.51
CD48-202ENST00000368046 ATP8A2Q9NTI2 1148 aa11.88□□□□□ -0.51
CD48-202ENST00000368046 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
CD48-202ENST00000368046 BTBD19C9JJ37 291 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 FKTNO75072 461 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 CHGBP05060 677 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 POLR3DP05423 398 aaPredicted RBP11.87□□□□□ -0.51
CD48-202ENST00000368046 PLCD1P51178 756 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 PDE1AP54750 535 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 IRX6P78412 446 aaPredicted RBP11.87□□□□□ -0.51
CD48-202ENST00000368046 NUCB1Q02818 461 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 TATDN1Q6P1N9 297 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 FASTKD5Q7L8L6 764 aaKnown RBP11.87□□□□□ -0.51
CD48-202ENST00000368046 ANKRD23Q86SG2 305 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 CHD1LQ86WJ1 897 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 EHD4Q9H223 541 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 ZFYVE28Q9HCC9 887 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 MCM9Q9NXL9 1143 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 SERPINB13Q9UIV8 391 aa11.87□□□□□ -0.51
CD48-202ENST00000368046 USP17L5A8MUK1 530 aa11.86□□□□□ -0.51
CD48-202ENST00000368046 PRKAB2O43741 272 aa11.86□□□□□ -0.51
CD48-202ENST00000368046 MBD4O95243 580 aa11.86□□□□□ -0.51
CD48-202ENST00000368046 ASNSP08243 561 aa11.86□□□□□ -0.51
CD48-202ENST00000368046 CRHR2Q13324 411 aa11.86□□□□□ -0.51
CD48-202ENST00000368046 TAF1CQ15572 869 aaPredicted RBP11.86□□□□□ -0.51
CD48-202ENST00000368046 SDR42E1Q8WUS8 393 aa11.86□□□□□ -0.51
CD48-202ENST00000368046 STRBPQ96SI9 672 aaKnown RBP11.86□□□□□ -0.51
CD48-202ENST00000368046 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
CD48-202ENST00000368046 DNAJC18Q9H819 358 aa11.86□□□□□ -0.51
CD48-202ENST00000368046 A0A0G2JLL6 359 aaPredicted RBP11.85□□□□□ -0.51
CD48-202ENST00000368046 EMP3P54852 163 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 SPP2Q13103 211 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 MOGSQ13724 837 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 SLC4A8Q2Y0W8 1093 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 GPAT2Q6NUI2 795 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 PRRT2Q7Z6L0 340 aaPredicted RBP11.85□□□□□ -0.51
CD48-202ENST00000368046 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 ZNF280CQ8ND82 737 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 APPBP2Q92624 585 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 OSBP2Q969R2 916 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 WDR18Q9BV38 432 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 AS3MTQ9HBK9 375 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 TAOK2Q9UL54 1235 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 SLC4A4Q9Y6R1 1079 aa11.85□□□□□ -0.51
CD48-202ENST00000368046 TRIM75PA6NK02 468 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 USP17L12C9JPN9 530 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 USP17L21D6R901 530 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 PDHXO00330 501 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 TLR2O60603 784 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 JAG1P78504 1218 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 SP3Q02447 781 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 GABPAQ06546 454 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 DGKZQ13574 1117 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 CERKLQ49MI3 558 aaPredicted RBP11.84□□□□□ -0.51
CD48-202ENST00000368046 CTU1Q7Z7A3 348 aaKnown RBP11.84□□□□□ -0.51
CD48-202ENST00000368046 CCDC84Q86UT8 332 aaPredicted RBP11.84□□□□□ -0.51
CD48-202ENST00000368046 TICAM2Q86XR7 235 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 EVI5LQ96CN4 794 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 FSD1Q9BTV5 496 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 OSBPL3Q9H4L5 887 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
CD48-202ENST00000368046 MYO5AQ9Y4I1 1855 aaKnown RBP11.83□□□□□ -0.52
CD48-202ENST00000368046 MAST2Q6P0Q8 1798 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 PATL2C9JE40 543 aaKnown RBP11.83□□□□□ -0.52
CD48-202ENST00000368046 GNAT2P19087 354 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 NUBP1P53384 320 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 PKN2Q16513 984 aaKnown RBP11.83□□□□□ -0.52
CD48-202ENST00000368046 SH3D19Q5HYK7 790 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 C12orf60Q5U649 245 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 GIMAP6Q6P9H5 292 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 AMOTL1Q8IY63 956 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 MCOLN1Q9GZU1 580 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 CABP5Q9NP86 173 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.83□□□□□ -0.52
CD48-202ENST00000368046 DOCK2Q92608 1830 aa11.83□□□□□ -0.52
CD48-202ENST00000368046 GSG1L2A8MUP6 293 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 C19orf81C9J6K1 198 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 USP17L10C9JJH3 530 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 GDF11O95390 407 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms