RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 RNF113AO15541 343 aaKnown RBP28.79■■■□□ 2.2
PFDN2-201ENST00000368010 JAG1P78504 1218 aa28.79■■■□□ 2.2
PFDN2-201ENST00000368010 TRIM17Q9Y577 477 aa28.79■■■□□ 2.2
PFDN2-201ENST00000368010 SLC4A4Q9Y6R1 1079 aa28.79■■■□□ 2.2
PFDN2-201ENST00000368010 IGHDP01880 384 aa28.78■■■□□ 2.2
PFDN2-201ENST00000368010 WDR18Q9BV38 432 aa28.78■■■□□ 2.2
PFDN2-201ENST00000368010 LNPKQ9C0E8 428 aa28.78■■■□□ 2.2
PFDN2-201ENST00000368010 STAP2Q9UGK3 403 aa28.78■■■□□ 2.2
PFDN2-201ENST00000368010 SLC45A1Q9Y2W3 748 aa28.78■■■□□ 2.2
PFDN2-201ENST00000368010 SHROOM1Q2M3G4 852 aaPredicted RBP28.77■■■□□ 2.2
PFDN2-201ENST00000368010 B4GALNT3Q6L9W6 998 aa28.77■■■□□ 2.2
PFDN2-201ENST00000368010 AMOTL1Q8IY63 956 aa28.77■■■□□ 2.2
PFDN2-201ENST00000368010 PROCA1Q8NCQ7 364 aaPredicted RBP28.77■■■□□ 2.2
PFDN2-201ENST00000368010 FSD1Q9BTV5 496 aa28.77■■■□□ 2.2
PFDN2-201ENST00000368010 AGTPBP1Q9UPW5 1226 aa28.77■■■□□ 2.2
PFDN2-201ENST00000368010 PTPRFP10586 1907 aa28.77■■■□□ 2.2
PFDN2-201ENST00000368010 CCDC85CA6NKD9 419 aa28.76■■■□□ 2.19
PFDN2-201ENST00000368010 GH2P01242 217 aa28.76■■■□□ 2.19
PFDN2-201ENST00000368010 PDE1AP54750 535 aa28.76■■■□□ 2.19
PFDN2-201ENST00000368010 GABPAQ06546 454 aa28.76■■■□□ 2.19
PFDN2-201ENST00000368010 CERKLQ49MI3 558 aaPredicted RBP28.76■■■□□ 2.19
PFDN2-201ENST00000368010 FBXO46Q6PJ61 603 aaPredicted RBP28.76■■■□□ 2.19
PFDN2-201ENST00000368010 OTOP1Q7RTM1 612 aa28.76■■■□□ 2.19
PFDN2-201ENST00000368010 CYP2C8P10632 490 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 CYP2D6P10635 497 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 SHMT1P34896 483 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 HMGCS2P54868 508 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 IRX6P78412 446 aaPredicted RBP28.75■■■□□ 2.19
PFDN2-201ENST00000368010 ARHGEF6Q15052 776 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 C17orf99Q6UX52 265 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 OSBP2Q969R2 916 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 STRBPQ96SI9 672 aaKnown RBP28.75■■■□□ 2.19
PFDN2-201ENST00000368010 EFCC1Q9HA90 598 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 CPA4Q9UI42 421 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 TAOK2Q9UL54 1235 aa28.75■■■□□ 2.19
PFDN2-201ENST00000368010 ADGRA2Q96PE1 1338 aa28.74■■■□□ 2.19
PFDN2-201ENST00000368010 EVX2Q03828 476 aa28.74■■■□□ 2.19
PFDN2-201ENST00000368010 MTMR2Q13614 643 aa28.74■■■□□ 2.19
PFDN2-201ENST00000368010 ABCB5Q2M3G0 1257 aa28.74■■■□□ 2.19
PFDN2-201ENST00000368010 SH3D19Q5HYK7 790 aa28.74■■■□□ 2.19
PFDN2-201ENST00000368010 BACE1P56817 501 aa28.73■■■□□ 2.19
PFDN2-201ENST00000368010 KIF22Q14807 665 aa28.73■■■□□ 2.19
PFDN2-201ENST00000368010 CHD1LQ86WJ1 897 aa28.73■■■□□ 2.19
PFDN2-201ENST00000368010 CABP5Q9NP86 173 aa28.73■■■□□ 2.19
PFDN2-201ENST00000368010 SWAP70Q9UH65 585 aa28.73■■■□□ 2.19
PFDN2-201ENST00000368010 HPS5Q9UPZ3 1129 aa28.73■■■□□ 2.19
PFDN2-201ENST00000368010 USP17L12C9JPN9 530 aa28.72■■■□□ 2.19
PFDN2-201ENST00000368010 USP17L21D6R901 530 aa28.72■■■□□ 2.19
PFDN2-201ENST00000368010 GPAA1O43292 621 aa28.72■■■□□ 2.19
PFDN2-201ENST00000368010 NUCB1Q02818 461 aa28.72■■■□□ 2.19
PFDN2-201ENST00000368010 TREML2Q5T2D2 321 aa28.72■■■□□ 2.19
PFDN2-201ENST00000368010 TMOD4Q9NZQ9 345 aa28.72■■■□□ 2.19
PFDN2-201ENST00000368010 PNMA3Q9UL41 463 aa28.72■■■□□ 2.19
PFDN2-201ENST00000368010 LOC285556D6RIA3 1793 aa28.71■■■□□ 2.19
PFDN2-201ENST00000368010 C19orf81C9J6K1 198 aa28.71■■■□□ 2.19
PFDN2-201ENST00000368010 USP17L10C9JJH3 530 aa28.71■■■□□ 2.19
PFDN2-201ENST00000368010 LACTBP83111 547 aaPredicted RBP28.71■■■□□ 2.19
PFDN2-201ENST00000368010 PABPC4Q13310 644 aaKnown RBP eCLIP28.71■■■□□ 2.193e-8■■■■□ 21.6
PFDN2-201ENST00000368010 C12orf60Q5U649 245 aa28.71■■■□□ 2.19
PFDN2-201ENST00000368010 SMCR8Q8TEV9 937 aaPredicted RBP28.71■■■□□ 2.19
PFDN2-201ENST00000368010 EVI5LQ96CN4 794 aa28.71■■■□□ 2.19
PFDN2-201ENST00000368010 ARPP21Q9UBL0 812 aaPredicted RBP28.71■■■□□ 2.19
PFDN2-201ENST00000368010 M0R2C6 588 aa28.7■■■□□ 2.18
PFDN2-201ENST00000368010 GNAT2P19087 354 aa28.7■■■□□ 2.18
PFDN2-201ENST00000368010 RAB3GAP1Q15042 981 aa28.7■■■□□ 2.18
PFDN2-201ENST00000368010 SLC44A5Q8NCS7 719 aa28.7■■■□□ 2.18
PFDN2-201ENST00000368010 DYNLL2Q96FJ2 89 aa28.7■■■□□ 2.18
PFDN2-201ENST00000368010 CYP2D7A0A087X1C5 515 aa28.69■■■□□ 2.18
PFDN2-201ENST00000368010 CAP1Q01518 475 aa28.69■■■□□ 2.18
PFDN2-201ENST00000368010 GIMAP6Q6P9H5 292 aa28.69■■■□□ 2.18
PFDN2-201ENST00000368010 BCRP11274 1271 aa28.68■■■□□ 2.18
PFDN2-201ENST00000368010 CTR9Q6PD62 1173 aa28.68■■■□□ 2.18
PFDN2-201ENST00000368010 FEZ1Q99689 392 aa28.68■■■□□ 2.18
PFDN2-201ENST00000368010 PTPN22Q9Y2R2 807 aa28.68■■■□□ 2.18
PFDN2-201ENST00000368010 BAZ2AQ9UIF9 1905 aaKnown RBP28.68■■■□□ 2.18
PFDN2-201ENST00000368010 GSG1L2A8MUP6 293 aa28.67■■■□□ 2.18
PFDN2-201ENST00000368010 MPHOSPH10O00566 681 aaKnown RBP28.67■■■□□ 2.18
PFDN2-201ENST00000368010 OSBPP22059 807 aa28.67■■■□□ 2.18
PFDN2-201ENST00000368010 ZMYM1Q5SVZ6 1142 aa28.67■■■□□ 2.18
PFDN2-201ENST00000368010 USP17L2Q6R6M4 530 aa28.66■■■□□ 2.18
PFDN2-201ENST00000368010 SEC62Q99442 399 aaKnown RBP28.66■■■□□ 2.18
PFDN2-201ENST00000368010 ARHGAP39Q9C0H5 1083 aa28.66■■■□□ 2.18
PFDN2-201ENST00000368010 GNRH1P01148 92 aa28.65■■■□□ 2.18
PFDN2-201ENST00000368010 APPP05067 770 aa28.65■■■□□ 2.18
PFDN2-201ENST00000368010 SBK1Q52WX2 424 aa28.65■■■□□ 2.18
PFDN2-201ENST00000368010 C16orf86Q6ZW13 317 aa28.65■■■□□ 2.18
PFDN2-201ENST00000368010 SMIM22K7EJ46 135 aa28.64■■■□□ 2.18
PFDN2-201ENST00000368010 ECM2O94769 699 aaPredicted RBP28.64■■■□□ 2.18
PFDN2-201ENST00000368010 GUCY1A2P33402 732 aa28.64■■■□□ 2.18
PFDN2-201ENST00000368010 TDO2P48775 406 aa28.64■■■□□ 2.18
PFDN2-201ENST00000368010 CDK8P49336 464 aa28.64■■■□□ 2.18
PFDN2-201ENST00000368010 SEPT2Q15019 361 aa28.64■■■□□ 2.18
PFDN2-201ENST00000368010 TMEM179Q6ZVK1 233 aa28.64■■■□□ 2.18
PFDN2-201ENST00000368010 CCDC17Q96LX7 622 aa28.64■■■□□ 2.18
PFDN2-201ENST00000368010 ASCC2Q9H1I8 757 aaPredicted RBP28.64■■■□□ 2.18
PFDN2-201ENST00000368010 EPB41L4AQ9HCS5 686 aaPredicted RBP28.64■■■□□ 2.18
PFDN2-201ENST00000368010 PSMC4P43686 418 aa28.63■■■□□ 2.17
PFDN2-201ENST00000368010 USP14P54578 494 aa28.63■■■□□ 2.17
PFDN2-201ENST00000368010 IRX3P78415 501 aaPredicted RBP28.63■■■□□ 2.17
PFDN2-201ENST00000368010 PLEKHM2Q8IWE5 1019 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms