RNA–Protein interactions for RNA: ENST00000367696.6

RC3H1-203, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RC3H1, Length 11,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-203ENST00000367696 PLA2G4DQ86XP0 818 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 GOLGA6CA6NDK9 693 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 HLA-DOAP06340 250 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 GOLGA6DP0CG33 693 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 CCDC121Q6ZUS5 278 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 B4GALNT4Q76KP1 1039 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 KRT25Q7Z3Z0 450 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
RC3H1-203ENST00000367696 GOLGA6AQ9NYA3 693 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 H7C1W4 665 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 SSR1P43307 286 aaKnown RBP9.28□□□□□ -0.92
RC3H1-203ENST00000367696 PUS3Q9BZE2 481 aaKnown RBP9.28□□□□□ -0.92
RC3H1-203ENST00000367696 LONRF2Q1L5Z9 754 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 CCDC77Q9BR77 488 aa9.28□□□□□ -0.92
RC3H1-203ENST00000367696 CARMIL3Q8ND23 1372 aa9.27□□□□□ -0.92
RC3H1-203ENST00000367696 GOLGA6BA6NDN3 693 aa9.27□□□□□ -0.92
RC3H1-203ENST00000367696 SLFN14P0C7P3 912 aa9.27□□□□□ -0.92
RC3H1-203ENST00000367696 LETM2Q2VYF4 491 aa9.27□□□□□ -0.92
RC3H1-203ENST00000367696 TSKSQ9UJT2 592 aa9.27□□□□□ -0.92
RC3H1-203ENST00000367696 LIFRP42702 1097 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 DNM2P50570 870 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 CLCN6P51797 869 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 MRPL12P52815 198 aaKnown RBP9.27□□□□□ -0.93
RC3H1-203ENST00000367696 FBXO38Q6PIJ6 1188 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 EHMT1Q9H9B1 1298 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 RFX7Q2KHR2 1363 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 FOXP1Q9H334 677 aaPredicted RBP9.27□□□□□ -0.93
RC3H1-203ENST00000367696 USP42Q9H9J4 1324 aaKnown RBP9.27□□□□□ -0.93
RC3H1-203ENST00000367696 IGKV5-2P06315 115 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 INCENPQ9NQS7 918 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 VPS54Q9P1Q0 977 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 A0A087WWV3 80 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 ZEB2O60315 1214 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 RPL13P26373 211 aaKnown RBP9.27□□□□□ -0.93
RC3H1-203ENST00000367696 IFT81Q8WYA0 676 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 NOX5Q96PH1 765 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 USP31Q70CQ4 1352 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 PDE8BO95263 885 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 FMNL3Q8IVF7 1028 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 IBSPP21815 317 aaPredicted RBP9.27□□□□□ -0.93
RC3H1-203ENST00000367696 ARID5BQ14865 1188 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 CCDC144BQ3MJ40 725 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 POTEDQ86YR6 584 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.27□□□□□ -0.93
RC3H1-203ENST00000367696 NSRP1Q9H0G5 558 aaKnown RBP9.27□□□□□ -0.93
RC3H1-203ENST00000367696 TNKSO95271 1327 aa9.27□□□□□ -0.93
RC3H1-203ENST00000367696 TERF2Q15554 542 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 TPTE2Q6XPS3 522 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 RPGRQ92834 1020 aaKnown RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 LRWD1Q9UFC0 647 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 CETN3O15182 167 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 HS2ST1Q7LGA3 356 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 IFT20Q8IY31 132 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 FMR1NBQ8N0W7 255 aaPredicted RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 PPARAQ07869 468 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 SLC9C1Q4G0N8 1177 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 CCDC65Q8IXS2 484 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 PPM1EQ8WY54 764 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 NUCKS1Q9H1E3 243 aaKnown RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 GOLGA5Q8TBA6 731 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 TCP1P17987 556 aaKnown RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 TBC1D5Q92609 795 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 EPN1Q9Y6I3 576 aaPredicted RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 RAPGEF1Q13905 1077 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 KRT13P13646 458 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 ATP6V1AP38606 617 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 COPB1P53618 953 aaKnown RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 RASAL2Q9UJF2 1139 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 ATP10DQ9P241 1426 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 PRAMEF22A3QJZ6 481 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 ATP2C2O75185 946 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 INPP5BP32019 993 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 GBP2P32456 591 aaPredicted RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 ZFYVE16Q7Z3T8 1539 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 HIBADHP31937 336 aaKnown RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 IPO4Q8TEX9 1081 aaKnown RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 EXOC4Q96A65 974 aa9.26□□□□□ -0.93
RC3H1-203ENST00000367696 RNF26Q9BY78 433 aaPredicted RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 STMN4Q9H169 189 aaPredicted RBP9.26□□□□□ -0.93
RC3H1-203ENST00000367696 ATP1A3P13637 1013 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 ARID5AQ03989 594 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 PAK2Q13177 524 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 EPHA10Q5JZY3 1008 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 IQGAP3Q86VI3 1631 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 LDHBP07195 334 aaKnown RBP9.25□□□□□ -0.93
RC3H1-203ENST00000367696 ZBTB38Q8NAP3 1195 aaPredicted RBP9.25□□□□□ -0.93
RC3H1-203ENST00000367696 FAM71BQ8TC56 605 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 PBRM1Q86U86 1689 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 TRAPPC10P48553 1259 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 DDX12PQ92771 950 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 LZTS2Q9BRK4 669 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 BLZF1Q9H2G9 400 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 EFCAB6Q5THR3 1501 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 CPLX4Q7Z7G2 160 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 PARP1P09874 1014 aaKnown RBP9.25□□□□□ -0.93
RC3H1-203ENST00000367696 PNMA6AP0CW24 399 aaPredicted RBP9.25□□□□□ -0.93
RC3H1-203ENST00000367696 RUFY4Q6ZNE9 571 aa9.25□□□□□ -0.93
RC3H1-203ENST00000367696 BPIFA3Q9BQP9 254 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms