RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 OAS2P29728 719 aaKnown RBP13.73□□□□□ -0.21
TPR-201ENST00000367478 TRIML1Q8N9V2 468 aa13.73□□□□□ -0.21
TPR-201ENST00000367478 ARMC9Q7Z3E5 817 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 TRIM56Q9BRZ2 755 aaKnown RBP13.72□□□□□ -0.21
TPR-201ENST00000367478 CTNNA1P35221 906 aaKnown RBP13.72□□□□□ -0.21
TPR-201ENST00000367478 TMCO4Q5TGY1 634 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 SFMBT2Q5VUG0 894 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 ZBTB3Q9H5J0 574 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 TROQ12816 1431 aaPredicted RBP13.72□□□□□ -0.21
TPR-201ENST00000367478 PTPDC1A2A3K4 754 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 MMEL1Q495T6 779 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 AMOTL2Q9Y2J4 779 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 CEP104O60308 925 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 SPDL1Q96EA4 605 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.72□□□□□ -0.218e-6■□□□□ 9
TPR-201ENST00000367478 CAPN7Q9Y6W3 813 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 ANKRD44Q8N8A2 993 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 TUBB6Q9BUF5 446 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 SPZ1Q9BXG8 430 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 IFIH1Q9BYX4 1025 aaKnown RBP13.72□□□□□ -0.21
TPR-201ENST00000367478 SERPINB6P35237 376 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 GARSP41250 739 aaKnown RBP13.72□□□□□ -0.21
TPR-201ENST00000367478 KCNH3Q9ULD8 1083 aa13.72□□□□□ -0.21
TPR-201ENST00000367478 SUN1O94901 812 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 MAN1A1P33908 653 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 JADE1Q6IE81 842 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 ANKRD2Q9GZV1 360 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.21
TPR-201ENST00000367478 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.212e-7■■■■□ 19.9
TPR-201ENST00000367478 RPAINQ86UA6 219 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 MCM9Q9NXL9 1143 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 RNF113AO15541 343 aaKnown RBP13.71□□□□□ -0.21
TPR-201ENST00000367478 ARHGEF35A5YM69 484 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 AKNAD1Q5T1N1 836 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 ZNF622Q969S3 477 aaKnown RBP eCLIP13.71□□□□□ -0.211e-10■■■□□ 15.6
TPR-201ENST00000367478 MRPL46Q9H2W6 279 aaKnown RBP13.71□□□□□ -0.21
TPR-201ENST00000367478 IGF1RP08069 1367 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 CCDC169A6NNP5 214 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 CCNT1O60563 726 aaKnown RBP13.71□□□□□ -0.21
TPR-201ENST00000367478 LMNB2Q03252 620 aa13.71□□□□□ -0.21
TPR-201ENST00000367478 CCDC13Q8IYE1 715 aa13.71□□□□□ -0.22
TPR-201ENST00000367478 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.22
TPR-201ENST00000367478 GOLGA5Q8TBA6 731 aa13.71□□□□□ -0.22
TPR-201ENST00000367478 CCDC68Q9H2F9 335 aa13.71□□□□□ -0.22
TPR-201ENST00000367478 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.22
TPR-201ENST00000367478 THAP12O43422 761 aa13.71□□□□□ -0.22
TPR-201ENST00000367478 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.22
TPR-201ENST00000367478 EIF2AK4Q9P2K8 1649 aaKnown RBP13.71□□□□□ -0.22
TPR-201ENST00000367478 ARHGEF10LQ9HCE6 1279 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 BAG2O95816 211 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 NXNQ6DKJ4 435 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 CFAP65Q6ZU64 1925 aaKnown RBP13.7□□□□□ -0.22
TPR-201ENST00000367478 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 A0A1B0GVL5 298 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 TTC6Q86TZ1 520 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 LRRC2Q9BYS8 371 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 MRRFQ96E11 262 aaKnown RBP13.7□□□□□ -0.22
TPR-201ENST00000367478 CARD6Q9BX69 1037 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 VPS37BQ9H9H4 285 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 KLHL30Q0D2K2 578 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 NONOQ15233 471 aaKnown RBP eCLIP13.7□□□□□ -0.22
TPR-201ENST00000367478 ELF2Q15723 593 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 PROCA1Q8NCQ7 364 aaPredicted RBP13.7□□□□□ -0.22
TPR-201ENST00000367478 CDKL2Q92772 493 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 HOOK2Q96ED9 719 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 RABEP2Q9H5N1 569 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 SART1O43290 800 aaKnown RBP13.7□□□□□ -0.22
TPR-201ENST00000367478 VPS16Q9H269 839 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 DNM2P50570 870 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 AK2P54819 239 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 FANCCQ00597 558 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 ASPHQ12797 758 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 PPP2R5CQ13362 524 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 PPP2R5DQ14738 602 aa13.7□□□□□ -0.22
TPR-201ENST00000367478 MAGEA1P43355 309 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 SND1Q7KZF4 910 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPR-201ENST00000367478 CAPS2Q9BXY5 557 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 TRIM31Q9BZY9 425 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 CFAP61Q8NHU2 1237 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 FBXO41Q8TF61 875 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 DNM3Q9UQ16 869 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 POLR2DO15514 142 aaKnown RBP13.69□□□□□ -0.22
TPR-201ENST00000367478 RSBN1LQ6PCB5 846 aaPredicted RBP13.69□□□□□ -0.22
TPR-201ENST00000367478 BANK1Q8NDB2 785 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 N4BP1O75113 896 aaKnown RBP13.69□□□□□ -0.22
TPR-201ENST00000367478 TSC1Q92574 1164 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 LDHBP07195 334 aaKnown RBP13.69□□□□□ -0.22
TPR-201ENST00000367478 MCTP2Q6DN12 878 aa13.69□□□□□ -0.22
TPR-201ENST00000367478 SCAF11Q99590 1463 aaKnown RBP13.69□□□□□ -0.22
TPR-201ENST00000367478 ANO1Q5XXA6 986 aa13.68□□□□□ -0.22
TPR-201ENST00000367478 HOXA7P31268 230 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms