RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 USP37Q86T82 979 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
RD3-201ENST00000367002 ADORA1P30542 326 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 CTSWP56202 376 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 PPARAQ07869 468 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 POLA2Q14181 598 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 SLC39A14Q15043 492 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 C8orf74Q6P047 294 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 NUP58Q9BVL2 599 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 RASAL2Q9UJF2 1139 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 ERBB4Q15303 1308 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 GNPATO15228 680 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 C11orf57Q6ZUT1 292 aaPredicted RBP12.84□□□□□ -0.35
RD3-201ENST00000367002 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 ZBTB38Q8NAP3 1195 aaPredicted RBP12.84□□□□□ -0.35
RD3-201ENST00000367002 OR8K1Q8NGG5 319 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 SDR42E1Q8WUS8 393 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 PPP2R2CQ9Y2T4 447 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 CLASP1Q7Z460 1538 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 SMIM23A6NLE4 172 aa12.84□□□□□ -0.35
RD3-201ENST00000367002 UTP14CQ5TAP6 766 aaKnown RBP12.84□□□□□ -0.35
RD3-201ENST00000367002 SECISBP2LQ93073 1101 aaKnown RBP12.84□□□□□ -0.35
RD3-201ENST00000367002 ZMYM6O95789 1325 aa12.83□□□□□ -0.35
RD3-201ENST00000367002 NEO1Q92859 1461 aa12.83□□□□□ -0.35
RD3-201ENST00000367002 CETN3O15182 167 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 OAS2P29728 719 aaKnown RBP12.83□□□□□ -0.36
RD3-201ENST00000367002 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 HERC4Q5GLZ8 1057 aaPredicted RBP12.83□□□□□ -0.36
RD3-201ENST00000367002 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.36
RD3-201ENST00000367002 ROBO2Q9HCK4 1378 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 TNKSO95271 1327 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 A0A1W2PRG0 241 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 TMEM110-MUSTN1A8MSY1 372 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
RD3-201ENST00000367002 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
RD3-201ENST00000367002 TICAM2Q86XR7 235 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 GDAP1L1Q96MZ0 367 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 CCDC87Q9NVE4 849 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 MAST3O60307 1309 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 USP6P35125 1406 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 ACTN2P35609 894 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 PHKA1P46020 1223 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 PTPN12Q05209 780 aaKnown RBP12.83□□□□□ -0.36
RD3-201ENST00000367002 PLS1Q14651 629 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 APOA5Q6Q788 366 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 AFAP1L1Q8TED9 768 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 SNX29Q8TEQ0 813 aa12.83□□□□□ -0.36
RD3-201ENST00000367002 WDR66Q8TBY9 1149 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 FAM207AQ9NSI2 230 aaPredicted RBP12.82□□□□□ -0.36
RD3-201ENST00000367002 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
RD3-201ENST00000367002 NEBLO76041 1014 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 PDE8BO95263 885 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 BCAMP50895 628 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 SLC9C1Q4G0N8 1177 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 KRT25Q7Z3Z0 450 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 LINC00301Q8NCQ3 95 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 PAIP2Q9BPZ3 127 aaKnown RBP12.82□□□□□ -0.36
RD3-201ENST00000367002 CCDC77Q9BR77 488 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 NDUFAB1O14561 156 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 UBE3CQ15386 1083 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 CCDC121Q6ZUS5 278 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 FCHSD1Q86WN1 690 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 CCDC25Q86WR0 208 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 TRIML1Q8N9V2 468 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 EEF2KMTQ96G04 330 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 SELENOSQ9BQE4 189 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 TCHPQ9BT92 498 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 RABEP2Q9H5N1 569 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 GREM2Q9H772 168 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 GPR108Q9NPR9 543 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
RD3-201ENST00000367002 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 UFL1O94874 794 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 CABP7Q86V35 215 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 CCDC51Q96ER9 411 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 NOX5Q96PH1 765 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 KIF2CQ99661 725 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 GOLGA6CA6NDK9 693 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 GOLGA6DP0CG33 693 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 HPDP32754 393 aaPredicted RBP12.81□□□□□ -0.36
RD3-201ENST00000367002 GJC1P36383 396 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 GYG1P46976 350 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 PLCB3Q01970 1234 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 UIMC1Q96RL1 719 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 GOLGA6AQ9NYA3 693 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.81□□□□□ -0.36
RD3-201ENST00000367002 ZDHHC9Q9Y397 364 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.81□□□□□ -0.36
RD3-201ENST00000367002 SAR1BQ9Y6B6 198 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 KIF4AO95239 1232 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 GTF2A1P52655 376 aaPredicted RBP12.81□□□□□ -0.36
RD3-201ENST00000367002 RPS8P62241 208 aaKnown RBP12.81□□□□□ -0.36
RD3-201ENST00000367002 PI16Q6UXB8 463 aa12.81□□□□□ -0.36
RD3-201ENST00000367002 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms