RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TEX11Q8IYF3 940 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 TRIM58Q8NG06 486 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 NOSTRINQ8IVI9 506 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 STIM2Q9P246 746 aa13.43□□□□□ -0.26
CDC42BPA-203ENST00000366766 HIBADHP31937 336 aaKnown RBP13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 WDR44Q5JSH3 913 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 E7EWF7 191 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 TRIM37O94972 964 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 CMA1P23946 247 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 GSTA5Q7RTV2 222 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 USP6P35125 1406 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 B4E1Z4 1266 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 BCRP11274 1271 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 VPS18Q9P253 973 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 PARP2Q9UGN5 583 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 TMOD4Q9NZQ9 345 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 LRRIQ1Q96JM4 1722 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 NONOQ15233 471 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 SECISBP2LQ93073 1101 aaKnown RBP13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 DRC1Q96MC2 740 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 PABPN1LA6NDY0 278 aaKnown RBP13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 WHAMMP3Q1A5X7 153 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 MAIP1Q8WWC4 291 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 FAM227BQ96M60 508 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 LIN9Q5TKA1 542 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 KRT40Q6A162 431 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 PPP1R7Q15435 360 aa13.42□□□□□ -0.26
CDC42BPA-203ENST00000366766 CDC37L1Q7L3B6 337 aa13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 MIGA1Q8NAN2 632 aa13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 MED4Q9NPJ6 270 aa13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 CCT6AP40227 531 aaKnown RBP13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 CHST3Q7LGC8 479 aa13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 JARID2Q92833 1246 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 CCNT1O60563 726 aaKnown RBP13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 ADCY7P51828 1080 aa13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 ZNF622Q969S3 477 aaKnown RBP eCLIP13.41□□□□□ -0.263e-7■■□□□ 13.1
CDC42BPA-203ENST00000366766 PDE4DQ08499 809 aa13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 SSX2IPQ9Y2D8 614 aa13.41□□□□□ -0.26
CDC42BPA-203ENST00000366766 DDAH1O94760 285 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 SEMA3EO15041 775 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 ZBTB16Q05516 673 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 CALCRLQ16602 461 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 TMX1Q9H3N1 280 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 RFX7Q2KHR2 1363 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 RAPGEF1Q13905 1077 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 RAB17Q9H0T7 212 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 POLR3EQ9NVU0 708 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 TXNDC16Q9P2K2 825 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 FAM89AQ96GI7 184 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 RASSF4Q9H2L5 321 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 TRAPPC3LQ5T215 181 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 CTSWP56202 376 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 C10orf67Q8IYJ2 551 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 RPAP1Q9BWH6 1393 aaPredicted RBP13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 DNM2P50570 870 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 CCDC6Q16204 474 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 ME3Q16798 604 aa13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 DNAJC21Q5F1R6 531 aaKnown RBP13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
CDC42BPA-203ENST00000366766 TTLL12Q14166 644 aaPredicted RBP13.4□□□□□ -0.27
CDC42BPA-203ENST00000366766 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 PSDA5PKW4 1024 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 GOLGA6CA6NDK9 693 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 GOLGA6DP0CG33 693 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 LACTBP83111 547 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 LETM2Q2VYF4 491 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 HSP90AA4PQ58FG1 418 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 GOLGA6AQ9NYA3 693 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 STX17P56962 302 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 UBE3CQ15386 1083 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 TRIM7Q9C029 511 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 GOLGA6BA6NDN3 693 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 PODXL2Q9NZ53 605 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 EFCAB8A8MWE9 144 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 H0YCG3 227 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 H7C1D1 291 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 N4BP1O75113 896 aaKnown RBP13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 GGA1Q9UJY5 639 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 BEND3Q5T5X7 828 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 ATP8B1O43520 1251 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 KRT9P35527 623 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 TCIRG1Q13488 830 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 INF2Q27J81 1249 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 JDP2Q8WYK2 163 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 GSPT1P15170 499 aaKnown RBP13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 TIMM10P62072 90 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 CAPZA3Q96KX2 299 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 CCDC87Q9NVE4 849 aa13.39□□□□□ -0.27
CDC42BPA-203ENST00000366766 RIOK3O14730 519 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 ERCC5P28715 1186 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 SLC8A3P57103 927 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 KARSQ15046 597 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 ASIC2Q16515 512 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZBTB38Q8NAP3 1195 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms