RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 GALNT17Q6IS24 598 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 CPLX4Q7Z7G2 160 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 CSGALNACT2Q8N6G5 542 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 NLRP3Q96P20 1036 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 NOC4LQ9BVI4 516 aaKnown RBP13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 NEXMIFQ5QGS0 1516 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 MICALL1Q8N3F8 863 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 OR8K1Q8NGG5 319 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 CCDC151A5D8V7 595 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 KCNA6P17658 529 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 ZSCAN26Q16670 478 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 CTNNBL1Q8WYA6 563 aaPredicted RBP13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 NDUFAB1O14561 156 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 HSPD1P10809 573 aaKnown RBP13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 HAUS4Q9H6D7 363 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 MTUS1Q9ULD2 1270 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 PHACTR2O75167 634 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 PPP6R2O75170 966 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 SLC9C1Q4G0N8 1177 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 BPIFA3Q9BQP9 254 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 ATP10DQ9P241 1426 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 ERCC6LQ2NKX8 1250 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 AKNAD1Q5T1N1 836 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 TIMM10P62072 90 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 TRAPPC10P48553 1259 aa13.2□□□□□ -0.3
CDC42BPA-202ENST00000366764 SYCE1Q8N0S2 351 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 MYL1P05976 194 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 APBA1Q02410 837 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 LRMPQ12912 555 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 FLOT1O75955 427 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 GNA14O95837 355 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 C10orf67Q8IYJ2 551 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 PLCD4Q9BRC7 762 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 CTNNA2P26232 953 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 CDCA7Q9BWT1 371 aaPredicted RBP13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 PARP1P09874 1014 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 ITGA6P23229 1130 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 INPP5BP32019 993 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 GSDMAQ96QA5 445 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 MCM9Q9NXL9 1143 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 PDE8AO60658 829 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 IFIH1Q9BYX4 1025 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 H7C1D1 291 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 ACTN2P35609 894 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 DNM2P50570 870 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 FERMT1Q9BQL6 677 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 ALDH8A1Q9H2A2 487 aaPredicted RBP13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 CUEDC2Q9H467 287 aa13.19□□□□□ -0.3
CDC42BPA-202ENST00000366764 HAUS3Q68CZ6 603 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 ZEB2O60315 1214 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 RETREG2Q8NC44 543 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 WDR19Q8NEZ3 1342 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 FOXP1Q9H334 677 aaPredicted RBP13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 SPDYE3A6NKU9 549 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 SPATA1Q5VX52 437 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 DEPDC5O75140 1603 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 SCRN1Q12765 414 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 NELFBQ8WX92 580 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 PPP1R13BQ96KQ4 1090 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 A0A1B0GUA9 196 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 RSRC1Q96IZ7 334 aaKnown RBP13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 SETDB2Q96T68 719 aa13.18□□□□□ -0.3
CDC42BPA-202ENST00000366764 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 ALDH3A1P30838 453 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 IRX3P78415 501 aaPredicted RBP13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 SREK1Q8WXA9 508 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 PYCARDQ9ULZ3 195 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 TULP4Q9NRJ4 1543 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 ARHGEF28Q8N1W1 1705 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 CHRNA2Q15822 529 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 ANKRD26Q9UPS8 1709 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 EXOC4Q96A65 974 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 PLCB1Q9NQ66 1216 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 LDHBP07195 334 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 UBL4BQ8N7F7 174 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 NDC80O14777 642 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 NDUFA8P51970 172 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 SPATA5Q8NB90 893 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 UTP11Q9Y3A2 253 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 GBP1P32455 592 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 IFT81Q8WYA0 676 aa13.17□□□□□ -0.3
CDC42BPA-202ENST00000366764 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 PNOCQ13519 176 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 ZNF174Q15697 407 aa13.16□□□□□ -0.3
CDC42BPA-202ENST00000366764 NSUN7Q8NE18 718 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms