RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TTC4O95801 387 aa18.52■□□□□ 0.55
NID1-202ENST00000366595 MAN1A1P33908 653 aa18.52■□□□□ 0.55
NID1-202ENST00000366595 PALM2Q8IXS6 379 aa18.52■□□□□ 0.55
NID1-202ENST00000366595 ANKRD42Q8N9B4 389 aa18.52■□□□□ 0.55
NID1-202ENST00000366595 GABPAQ06546 454 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 PLIN2Q99541 437 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 IFIH1Q9BYX4 1025 aaKnown RBP18.51■□□□□ 0.55
NID1-202ENST00000366595 RPS6KB1P23443 525 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 PHEXP78562 749 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 LONRF2Q1L5Z9 754 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 NCOA1Q15788 1441 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 EFCAB8A8MWE9 144 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 BAG2O95816 211 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 PICALMQ13492 652 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 NYXQ9GZU5 481 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 VEZTQ9HBM0 779 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 TPX2Q9ULW0 747 aaKnown RBP18.51■□□□□ 0.55
NID1-202ENST00000366595 SCAF11Q99590 1463 aaKnown RBP18.51■□□□□ 0.55
NID1-202ENST00000366595 ESRRGP62508 458 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 CXorf38Q8TB03 319 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 XAGE3Q8WTP9 111 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 KRT12Q99456 494 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 RABEP2Q9H5N1 569 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 NFE2L3Q9Y4A8 694 aa18.51■□□□□ 0.55
NID1-202ENST00000366595 ARHGEF35A5YM69 484 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 ZNF622Q969S3 477 aaKnown RBP eCLIP18.5■□□□□ 0.55
NID1-202ENST00000366595 ATP8B1O43520 1251 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 CCDC13Q8IYE1 715 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 HAUS1Q96CS2 278 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 ANKRD2Q9GZV1 360 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 CHPF2Q9P2E5 772 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 EPRSP07814 1512 aaKnown RBP18.5■□□□□ 0.55
NID1-202ENST00000366595 CCDC169A6NNP5 214 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 RUNDC3BQ96NL0 473 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 ZNF219Q9P2Y4 722 aaPredicted RBP18.5■□□□□ 0.55
NID1-202ENST00000366595 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 TMCO4Q5TGY1 634 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 ZBTB9Q96C00 473 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 ZBTB21Q9ULJ3 1066 aa18.5■□□□□ 0.55
NID1-202ENST00000366595 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 PFDN6O15212 129 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 TCP1P17987 556 aaKnown RBP18.49■□□□□ 0.55
NID1-202ENST00000366595 BEND3Q5T5X7 828 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 KRT25Q7Z3Z0 450 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 CERS3Q8IU89 383 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 PDZD8Q8NEN9 1154 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 CTAGE3PQ8IX95 158 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 BCAS4Q8TDM0 211 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 ARAP1Q96P48 1450 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 SUN1O94901 812 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 TSC1Q92574 1164 aa18.49■□□□□ 0.55
NID1-202ENST00000366595 RNF8O76064 485 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 SIRT1Q96EB6 747 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 RSAD2Q8WXG1 361 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 CCDC124Q96CT7 223 aaKnown RBP18.48■□□□□ 0.55
NID1-202ENST00000366595 LRGUKQ96M69 825 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 SLF1Q9BQI6 1058 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.48■□□□□ 0.55
NID1-202ENST00000366595 TTC38Q5R3I4 469 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 TEKT1Q969V4 418 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 SART1O43290 800 aaKnown RBP18.48■□□□□ 0.55
NID1-202ENST00000366595 WAPLQ7Z5K2 1190 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 TRIM6Q9C030 488 aaPredicted RBP18.48■□□□□ 0.55
NID1-202ENST00000366595 AOX1Q06278 1338 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 MAGEB6Q8N7X4 407 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 MGARPQ8TDB4 240 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 USTQ9Y2C2 406 aa18.48■□□□□ 0.55
NID1-202ENST00000366595 POLR2DO15514 142 aaKnown RBP18.47■□□□□ 0.55
NID1-202ENST00000366595 PPP2R5DQ14738 602 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 POSTNQ15063 836 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 JADE1Q6IE81 842 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 EFCC1Q9HA90 598 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 TAB2Q9NYJ8 693 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 PSDA5PKW4 1024 aaPredicted RBP18.47■□□□□ 0.55
NID1-202ENST00000366595 ZNF202O95125 648 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 P4HA1P13674 534 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 PSPC1Q8WXF1 523 aaKnown RBP18.47■□□□□ 0.55
NID1-202ENST00000366595 IWS1Q96ST2 819 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.47■□□□□ 0.55
NID1-202ENST00000366595 SUPT6HQ7KZ85 1726 aaKnown RBP18.47■□□□□ 0.55
NID1-202ENST00000366595 FAM135AQ9P2D6 1515 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 TRIM42Q8IWZ5 723 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 LZTS2Q9BRK4 669 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 BCL2L12Q9HB09 334 aa18.47■□□□□ 0.55
NID1-202ENST00000366595 BRDTQ58F21 947 aaPredicted RBP18.46■□□□□ 0.55
NID1-202ENST00000366595 ARMC9Q7Z3E5 817 aa18.46■□□□□ 0.55
NID1-202ENST00000366595 GOLGA8CPA6NN73 597 aa18.46■□□□□ 0.55
NID1-202ENST00000366595 LDHBP07195 334 aaKnown RBP18.46■□□□□ 0.55
NID1-202ENST00000366595 RAD51AP2Q09MP3 1159 aa18.46■□□□□ 0.55
NID1-202ENST00000366595 PDZD4Q76G19 769 aaPredicted RBP18.46■□□□□ 0.55
NID1-202ENST00000366595 EFCAB13Q8IY85 973 aa18.46■□□□□ 0.55
NID1-202ENST00000366595 KDM2BQ8NHM5 1336 aa18.46■□□□□ 0.55
NID1-202ENST00000366595 GARSP41250 739 aaKnown RBP18.46■□□□□ 0.55
NID1-202ENST00000366595 OR8K1Q8NGG5 319 aa18.46■□□□□ 0.55
NID1-202ENST00000366595 EXOC3O60645 756 aa18.46■□□□□ 0.55
NID1-202ENST00000366595 MX2P20592 715 aa18.46■□□□□ 0.55
NID1-202ENST00000366595 MTX1Q13505 466 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms