RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 CHGBP05060 677 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 KCNA6P17658 529 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 FKBP4Q02790 459 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMYD3-201ENST00000366516 GOLGA8FQ08AF8 430 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 GOLGA8DPQ0D2H9 430 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 NFXL1Q6ZNB6 911 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 GSDMAQ96QA5 445 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 EIF3CQ99613 913 aaKnown RBP10.3□□□□□ -0.76
SMYD3-201ENST00000366516 MTA3Q9BTC8 594 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 CNNM2Q9H8M5 875 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 TRIM66O15016 1216 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 POLR2DO15514 142 aaKnown RBP10.3□□□□□ -0.76
SMYD3-201ENST00000366516 GPAA1O43292 621 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 PPFIA3O75145 1194 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
SMYD3-201ENST00000366516 TATP17735 454 aaPredicted RBP10.3□□□□□ -0.76
SMYD3-201ENST00000366516 XBP1P17861 261 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 BMP6P22004 513 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 HAND2P61296 217 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 TIMM10P62072 90 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 PDE4BQ07343 736 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 GBP6Q6ZN66 633 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 FOXP4Q8IVH2 680 aaPredicted RBP10.3□□□□□ -0.76
SMYD3-201ENST00000366516 IFNL2Q8IZJ0 200 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 DCAF5Q96JK2 942 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 CLIC6Q96NY7 704 aa10.3□□□□□ -0.76
SMYD3-201ENST00000366516 SRPRBQ9Y5M8 271 aaKnown RBP10.3□□□□□ -0.76
SMYD3-201ENST00000366516 TOM1O60784 492 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 MMP1P03956 469 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 CDC27P30260 824 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 PBX1P40424 430 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 FMR1Q06787 632 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMYD3-201ENST00000366516 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
SMYD3-201ENST00000366516 CDKAL1Q5VV42 579 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 SUGP1Q8IWZ8 645 aaKnown RBP10.29□□□□□ -0.76
SMYD3-201ENST00000366516 PNKPQ96T60 521 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 ZSWIM4Q9H7M6 989 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 FAM204AQ9H8W3 233 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 ADD3Q9UEY8 706 aaKnown RBP10.29□□□□□ -0.76
SMYD3-201ENST00000366516 LCMT1Q9UIC8 334 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 FBXO2Q9UK22 296 aaPredicted RBP10.29□□□□□ -0.76
SMYD3-201ENST00000366516 MYO6Q9UM54 1294 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 JRKLQ9Y4A0 524 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 MYH7P12883 1935 aa10.29□□□□□ -0.76
SMYD3-201ENST00000366516 A0A087WUV0 522 aaPredicted RBP10.28□□□□□ -0.76
SMYD3-201ENST00000366516 PHKG2P15735 406 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 IFNAR1P17181 557 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 VSNL1P62760 191 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 RBL2Q08999 1139 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 PPP2R5BQ15173 497 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 CCDC57Q2TAC2 916 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 RAD9BQ6WBX8 426 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 SLC35F6Q8N357 371 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 SMARCC1Q92922 1105 aaPredicted RBP10.28□□□□□ -0.76
SMYD3-201ENST00000366516 ZNF496Q96IT1 587 aaPredicted RBP10.28□□□□□ -0.76
SMYD3-201ENST00000366516 ZNF512BQ96KM6 892 aaPredicted RBP10.28□□□□□ -0.76
SMYD3-201ENST00000366516 CRACR2AQ9BSW2 395 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 HAUS4Q9H6D7 363 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 GPHNQ9NQX3 736 aaPredicted RBP10.28□□□□□ -0.76
SMYD3-201ENST00000366516 AATFQ9NY61 560 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMYD3-201ENST00000366516 SLC12A7Q9Y666 1083 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 UBN2Q6ZU65 1347 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 ECM29Q5VYK3 1845 aa10.28□□□□□ -0.76
SMYD3-201ENST00000366516 A0A0G2JLW4 131 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 ATP5J2-PTCD1G3V325 749 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 ACTN4O43707 911 aaKnown RBP10.27□□□□□ -0.76
SMYD3-201ENST00000366516 PTCD1O75127 700 aaKnown RBP10.27□□□□□ -0.76
SMYD3-201ENST00000366516 RNF40O75150 1001 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 DEXIO95424 95 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 RHOXF2BP0C7M4 288 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 GYS2P54840 703 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 UBE3CQ15386 1083 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.76
SMYD3-201ENST00000366516 NBPF14Q5TI25 921 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 ZNF662Q6ZS27 426 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 MICU3Q86XE3 530 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 STK11IPQ8N1F8 1099 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 TMTC2Q8N394 836 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 FERMT2Q96AC1 680 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 RHOXF2Q9BQY4 288 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 TEX13AQ9BXU3 409 aaPredicted RBP10.27□□□□□ -0.76
SMYD3-201ENST00000366516 KRT23Q9C075 422 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 SERTAD1Q9UHV2 236 aa10.27□□□□□ -0.76
SMYD3-201ENST00000366516 CCDC9Q9Y3X0 531 aaKnown RBP10.27□□□□□ -0.76
SMYD3-201ENST00000366516 MST1RQ04912 1400 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 TJP1Q07157 1748 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 NUP188Q5SRE5 1749 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 PSMD14O00487 310 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 FOXP2O15409 715 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 GUCY2CP25092 1073 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 KRT83P78385 493 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 SEMA3FQ13275 785 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 SLC39A6Q13433 755 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 ALX1Q15699 326 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 NTRK3Q16288 839 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 TAF7LQ5H9L4 462 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 TMEM67Q5HYA8 995 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 TADA2BQ86TJ2 420 aa10.27□□□□□ -0.77
SMYD3-201ENST00000366516 SPATS2Q86XZ4 545 aaKnown RBP10.27□□□□□ -0.77
SMYD3-201ENST00000366516 DIS3L2Q8IYB7 885 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms