RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CNNM2Q9H8M5 875 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 FZD1Q9UP38 647 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 SNCAIPQ9Y6H5 919 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 LAMB1P07942 1786 aa16.4■□□□□ 0.22
NSMCE1-201ENST00000361439 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
NSMCE1-201ENST00000361439 ECE1P42892 770 aa16.39■□□□□ 0.21
NSMCE1-201ENST00000361439 ZNF157P51786 506 aaPredicted RBP16.39■□□□□ 0.21
NSMCE1-201ENST00000361439 TMEM179Q6ZVK1 233 aa16.39■□□□□ 0.21
NSMCE1-201ENST00000361439 CYP21A2P08686 494 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 PTPRAP18433 802 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 RASA1P20936 1047 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 EVX2Q03828 476 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 CTDSPL2Q05D32 466 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 RRP1BQ14684 758 aaKnown RBP16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 TSGA10IPQ3SY00 556 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 SLC44A5Q8NCS7 719 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 CLMNQ96JQ2 1002 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 ZBTB21Q9ULJ3 1066 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
NSMCE1-201ENST00000361439 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 SMIM22K7EJ46 135 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 CXCL11O14625 94 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 GH2P01242 217 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 SLC10A3P09131 477 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 SLURP2P0DP57 97 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 HAND2P61296 217 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 TRDNQ13061 729 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 PPIL2Q13356 520 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 C8orf34Q49A92 452 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 RASAL3Q86YV0 1011 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 REM2Q8IYK8 340 aaPredicted RBP16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 ESR2Q92731 530 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 WDR18Q9BV38 432 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 USP26Q9BXU7 913 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 KRT23Q9C075 422 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 NBPF3Q9H094 633 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 KANSL2Q9H9L4 492 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 ELP3Q9H9T3 547 aa16.37■□□□□ 0.21
NSMCE1-201ENST00000361439 GDF11O95390 407 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 ZKSCAN1P17029 563 aaPredicted RBP16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 NOGQ13253 232 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 KRT32Q14532 448 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 SPRYD7Q5W111 196 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 CREB3L3Q68CJ9 461 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 TBC1D10CQ8IV04 446 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 KCNB2Q92953 911 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 OPTNQ96CV9 577 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 WNK4Q96J92 1243 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 TCP11L1Q9NUJ3 509 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 KCNH4Q9UQ05 1017 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 ZHX2Q9Y6X8 837 aa16.36■□□□□ 0.21
NSMCE1-201ENST00000361439 LAMA4Q16363 1823 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 OTOFQ9HC10 1997 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 FAM155AB1AL88 458 aaPredicted RBP16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 SLC27A2O14975 620 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 AKR1B1P15121 316 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 MCCP23508 829 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 HSPA4P34932 840 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 INHBEP58166 350 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 SYNPO2Q9UMS6 1093 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 AFG3L2Q9Y4W6 797 aa16.35■□□□□ 0.21
NSMCE1-201ENST00000361439 DOCK1Q14185 1865 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 TSPY2A6NKD2 308 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 RANBP6O60518 1105 aaKnown RBP16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 PRDM1O75626 825 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 MAP2K2P36507 400 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 GTF2A2P52657 109 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 ZNF280CQ8ND82 737 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 NCOA7Q8NI08 942 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 CAPNS2Q96L46 248 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 SH2D4AQ9H788 454 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 TOMM22Q9NS69 142 aa16.34■□□□□ 0.21
NSMCE1-201ENST00000361439 IGKV6D-41A0A0C4DH26 115 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 MANSC4A6NHS7 340 aaPredicted RBP16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 C19orf81C9J6K1 198 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 E7EWF7 191 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 IRF6O14896 467 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 GUCY1A2P33402 732 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 USP14P54578 494 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 JAG1P78504 1218 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 TFAP4Q01664 338 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 SNAPC2Q13487 334 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 PAXIP1Q6ZW49 1069 aaPredicted RBP16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 IQCA1Q86XH1 822 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 STK11IPQ8N1F8 1099 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 OTUD5Q96G74 571 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 MTA3Q9BTC8 594 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 NYAP2Q9P242 653 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 NEDD4P46934 1319 aa16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 WDR33Q9C0J8 1336 aaKnown RBP16.33■□□□□ 0.2
NSMCE1-201ENST00000361439 TESPA1A2RU30 521 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms