RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 UBASH3AP57075 661 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 GSTO1P78417 241 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 TRIML1Q8N9V2 468 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 MAP3K14Q99558 947 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 XPO4Q9C0E2 1151 aaKnown RBP10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 GNPATO15228 680 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 LMOD1P29536 600 aaPredicted RBP10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 FANCCQ00597 558 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 MLKLQ8NB16 471 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 OSBPL5Q9H0X9 879 aaPredicted RBP10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 WNK3Q9BYP7 1800 aa10.66□□□□□ -0.7
GTF3C2-202ENST00000359541 MROH7-TTC4A0A0A0MT08 1334 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 TSPY2A6NKD2 308 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 KCNQ2O43526 872 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 PTPREP23469 700 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 POSTNQ15063 836 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 CCDC144BQ3MJ40 725 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 LINC00116Q8NCU8 138 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 KIF18AQ8NI77 898 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 FAM84BQ96KN1 310 aaPredicted RBP10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 CLIC6Q96NY7 704 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 ZNF287Q9HBT7 754 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 CABP5Q9NP86 173 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 TIAM2Q8IVF5 1701 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 PRPF3O43395 683 aaKnown RBP10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 BAG3O95817 575 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 PNOCQ13519 176 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 FERMT2Q96AC1 680 aa10.65□□□□□ -0.7
GTF3C2-202ENST00000359541 RIOK3O14730 519 aaKnown RBP10.65□□□□□ -0.71
GTF3C2-202ENST00000359541 LDHCP07864 332 aa10.65□□□□□ -0.71
GTF3C2-202ENST00000359541 TOP1P11387 765 aaKnown RBP10.65□□□□□ -0.71
GTF3C2-202ENST00000359541 ISM2Q6H9L7 571 aa10.65□□□□□ -0.71
GTF3C2-202ENST00000359541 CERS3Q8IU89 383 aa10.65□□□□□ -0.71
GTF3C2-202ENST00000359541 C8orf37Q96NL8 207 aa10.65□□□□□ -0.71
GTF3C2-202ENST00000359541 RIOK1Q9BRS2 568 aaKnown RBP10.65□□□□□ -0.71
GTF3C2-202ENST00000359541 SRPRBQ9Y5M8 271 aaKnown RBP10.65□□□□□ -0.71
GTF3C2-202ENST00000359541 A0A087WWV3 80 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 USP17L12C9JPN9 530 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 USP17L21D6R901 530 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 TXLNAP40222 546 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 USP5P45974 858 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 MEX3CQ5U5Q3 659 aaKnown RBP10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 FBXO33Q7Z6M2 555 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 WDR66Q8TBY9 1149 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 CELF1Q92879 486 aaKnown RBP10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 ANKIB1Q9P2G1 1089 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 CCNL1Q9UK58 526 aaPredicted RBP10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 CALML3P27482 149 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 GNAQP50148 359 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 VPS72Q15906 364 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 TBC1D9BQ66K14 1250 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 ENAHQ8N8S7 591 aaPredicted RBP10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 POLR2DO15514 142 aaKnown RBP10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 ORC4O43929 436 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 RFC4P35249 363 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 NLRP5P59047 1200 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 DYNLL1P63167 89 aaKnown RBP10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 KAT14Q9H8E8 782 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 ZHX1Q9UKY1 873 aaPredicted RBP10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 V9GY48 417 aaPredicted RBP10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 PHLPP1O60346 1717 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 C4AP0C0L4 1744 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 C4BP0C0L5 1744 aa10.64□□□□□ -0.71
GTF3C2-202ENST00000359541 SEC23AQ15436 765 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 PCDHA5Q9Y5H7 936 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 GUCY1A2P33402 732 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 MECOMQ03112 1051 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 CT47A1Q5JQC4 288 aaPredicted RBP10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 HOMER1Q86YM7 354 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 VPS54Q9P1Q0 977 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 PRDM1O75626 825 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 LONRF3Q496Y0 759 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 ZNF804AQ7Z570 1209 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 NBPF11Q86T75 865 aa10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 CMTR1Q8N1G2 835 aaKnown RBP10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 NSUN4Q96CB9 384 aaKnown RBP10.63□□□□□ -0.71
GTF3C2-202ENST00000359541 DOCK2Q92608 1830 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 KCNJ6P48051 423 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 NR5A1Q13285 461 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 PDILTQ8N807 584 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 ANKRD20A12PQ8NF67 263 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 MKNK2Q9HBH9 465 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 MCM9Q9NXL9 1143 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 TFCP2L1Q9NZI6 479 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 FBXO2Q9UK22 296 aaPredicted RBP10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 SLIT2O94813 1529 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 TRAPPC10P48553 1259 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 SYCP1Q15431 976 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 CTR9Q6PD62 1173 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 ADGRA1Q86SQ6 560 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 PDCL2Q8N4E4 241 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 LEMD3Q9Y2U8 911 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 LAMB2P55268 1798 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 PSDA5PKW4 1024 aaPredicted RBP10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 ZSCAN12O43309 604 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 FILIP1LQ4L180 1135 aa10.62□□□□□ -0.71
GTF3C2-202ENST00000359541 TMTC3Q6ZXV5 915 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms