RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 GOLGA8FQ08AF8 430 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 GOLGA8DPQ0D2H9 430 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 ALX1Q15699 326 aa12.74□□□□□ -0.37
SSU72-202ENST00000359060 GSTO1P78417 241 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 ARHGAP29Q52LW3 1261 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 INTS5Q6P9B9 1019 aaKnown RBP12.73□□□□□ -0.37
SSU72-202ENST00000359060 OXER1Q8TDS5 423 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 STAG1Q8WVM7 1258 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 TBC1D9BQ66K14 1250 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 ZSWIM4Q9H7M6 989 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 ZNF804BA4D1E1 1349 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 BAZ2BQ9UIF8 2168 aaKnown RBP12.73□□□□□ -0.37
SSU72-202ENST00000359060 PLEKHA8P1O95397 391 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 CALML3P27482 149 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 NAPAP54920 295 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 SGMS1Q86VZ5 419 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 IQUBQ8NA54 791 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 NUP88Q99567 741 aaPredicted RBP12.73□□□□□ -0.37
SSU72-202ENST00000359060 CSRNP2Q9H175 543 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 BSDC1Q9NW68 430 aaPredicted RBP12.73□□□□□ -0.37
SSU72-202ENST00000359060 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 ENGASEQ8NFI3 743 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
SSU72-202ENST00000359060 ST5P78524 1137 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 MECOMQ03112 1051 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 PPP2R5BQ15173 497 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 SHC4Q6S5L8 630 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
SSU72-202ENST00000359060 GPR101Q96P66 508 aaPredicted RBP12.72□□□□□ -0.37
SSU72-202ENST00000359060 BLZF1Q9H2G9 400 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
SSU72-202ENST00000359060 IMPACTQ9P2X3 320 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 NMT2O60551 498 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 NTSR2O95665 410 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 CYP2D6P10635 497 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 CCT6AP40227 531 aaKnown RBP12.72□□□□□ -0.37
SSU72-202ENST00000359060 GNAQP50148 359 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
SSU72-202ENST00000359060 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 DHX40Q8IX18 779 aaKnown RBP12.72□□□□□ -0.37
SSU72-202ENST00000359060 MLKLQ8NB16 471 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 GPKOWQ92917 476 aaPredicted RBP eCLIP12.72□□□□□ -0.37
SSU72-202ENST00000359060 TCP11L1Q9NUJ3 509 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 USP21Q9UK80 565 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 TEX35Q5T0J7 233 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 CLEC4GQ6UXB4 293 aa12.72□□□□□ -0.37
SSU72-202ENST00000359060 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
SSU72-202ENST00000359060 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
SSU72-202ENST00000359060 THRAP3Q9Y2W1 955 aaKnown RBP12.72□□□□□ -0.37
SSU72-202ENST00000359060 FOXN1O15353 648 aa12.71□□□□□ -0.37
SSU72-202ENST00000359060 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
SSU72-202ENST00000359060 CASQ1P31415 396 aa12.71□□□□□ -0.37
SSU72-202ENST00000359060 WDR66Q8TBY9 1149 aa12.71□□□□□ -0.37
SSU72-202ENST00000359060 COBLO75128 1261 aa12.71□□□□□ -0.37
SSU72-202ENST00000359060 SLU7O95391 586 aaKnown RBP12.71□□□□□ -0.37
SSU72-202ENST00000359060 EIF6P56537 245 aaKnown RBP12.71□□□□□ -0.37
SSU72-202ENST00000359060 PTGDRQ13258 359 aa12.71□□□□□ -0.37
SSU72-202ENST00000359060 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
SSU72-202ENST00000359060 ENAHQ8N8S7 591 aaPredicted RBP12.71□□□□□ -0.37
SSU72-202ENST00000359060 FAM84BQ96KN1 310 aaPredicted RBP12.71□□□□□ -0.37
SSU72-202ENST00000359060 WTIPA6NIX2 430 aaPredicted RBP12.71□□□□□ -0.38
SSU72-202ENST00000359060 CDC25BP30305 580 aa12.71□□□□□ -0.38
SSU72-202ENST00000359060 ADKP55263 362 aaKnown RBP12.71□□□□□ -0.38
SSU72-202ENST00000359060 SARM1Q6SZW1 724 aa12.71□□□□□ -0.38
SSU72-202ENST00000359060 CGNQ9P2M7 1197 aaKnown RBP12.71□□□□□ -0.38
SSU72-202ENST00000359060 SPATA31A1Q5TZJ5 1347 aa12.71□□□□□ -0.38
SSU72-202ENST00000359060 BCL9O00512 1426 aa12.71□□□□□ -0.38
SSU72-202ENST00000359060 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 IDEP14735 1019 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 FGFR2P21802 821 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 PNMA1Q8ND90 353 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 EPSTI1Q96J88 318 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 TIGD1Q96MW7 591 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 BAG1Q99933 345 aaPredicted RBP12.7□□□□□ -0.38
SSU72-202ENST00000359060 CDC25AP30304 524 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 DTHD1Q6ZMT9 781 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 VGLL2Q8N8G2 317 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 CCDC148Q8NFR7 591 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 RASGRP4Q8TDF6 673 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 DYNLL2Q96FJ2 89 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 SPTLC3Q9NUV7 552 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 U2AF2P26368 475 aaKnown RBP eCLIP12.7□□□□□ -0.387e-8■■□□□ 13
SSU72-202ENST00000359060 KIF4BQ2VIQ3 1234 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 LETM2Q2VYF4 491 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 SLF2Q8IX21 1173 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 SMYD4Q8IYR2 804 aaPredicted RBP12.7□□□□□ -0.38
SSU72-202ENST00000359060 SYMPKQ92797 1274 aaKnown RBP12.7□□□□□ -0.38
SSU72-202ENST00000359060 TRIM47Q96LD4 638 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 ARPP21Q9UBL0 812 aaPredicted RBP12.7□□□□□ -0.38
SSU72-202ENST00000359060 CTNND2Q9UQB3 1225 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 SCG2P13521 617 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 CASP1P29466 404 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 CCDC178Q5BJE1 867 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 AXDND1Q5T1B0 1012 aaPredicted RBP12.7□□□□□ -0.38
SSU72-202ENST00000359060 FAM196AQ6ZSG2 479 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 CCDC12Q8WUD4 166 aaPredicted RBP12.7□□□□□ -0.38
SSU72-202ENST00000359060 VPS16Q9H269 839 aa12.7□□□□□ -0.38
SSU72-202ENST00000359060 LZTFL1Q9NQ48 299 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms