RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 IQCA1Q86XH1 822 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 DNAJC5GQ8N7S2 189 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 ZBTB10Q96DT7 871 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 XAGE2Q96GT9 111 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 L3MBTL3Q96JM7 780 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 SRP68Q9UHB9 627 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 TTC41PQ6P2S7 1318 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 SLC5A9Q2M3M2 681 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 C7orf43Q8WVR3 580 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 FAM204AQ9H8W3 233 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 CHUKO15111 745 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 SERPINB2P05120 415 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 LMNB1P20700 586 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 CCT5P48643 541 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 TTC6Q86TZ1 520 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 HOMER1Q86YM7 354 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 RPAP2Q8IXW5 612 aaPredicted RBP10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 FAM107BQ9H098 131 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 TNMDQ9H2S6 317 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 DACT1Q9NYF0 836 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 CCDC151A5D8V7 595 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 GRM8O00222 908 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 HMMRO75330 724 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 SNUPNO95149 360 aaKnown RBP10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 RBM43Q6ZSC3 357 aaKnown RBP10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 RILPL2Q969X0 211 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 CAPN7Q9Y6W3 813 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 MYH3P11055 1940 aa10.62□□□□□ -0.71
SMARCAL1-202ENST00000358207 NEURL1BA8MQ27 555 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 MAFGO15525 162 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 PYGLP06737 847 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 HOXB7P09629 217 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 GCKP35557 465 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 ICA1Q05084 483 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 ARMCX5Q6P1M9 558 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 CCDC24Q8N4L8 307 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 FAM89AQ96GI7 184 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 IRX2Q9BZI1 471 aaPredicted RBP10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 NDUFB9Q9Y6M9 179 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 HLFQ16534 295 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 CRY2Q49AN0 593 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 KAZALD1Q96I82 304 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 ZNF232Q9UNY5 417 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 A0A0G2JLW4 131 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 INPP5BP32019 993 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 ATP8B2P98198 1209 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 ACTN3Q08043 901 aaPredicted RBP10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 SF3A1Q15459 793 aaKnown RBP10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 C11orf57Q6ZUT1 292 aaPredicted RBP10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 ANKRD18AQ8IVF6 992 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 ZNF594Q96JF6 807 aaPredicted RBP10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 PICK1Q9NRD5 415 aa10.61□□□□□ -0.71
SMARCAL1-202ENST00000358207 RDXP35241 583 aaKnown RBP10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 CLNS1AP54105 237 aaKnown RBP10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 PRR5LQ6MZQ0 368 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 BICDL1Q6ZP65 573 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 TTLL6Q8N841 843 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 C3orf20Q8ND61 904 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 LINS1Q8NG48 757 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 RABGGTAQ92696 567 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 LARP6Q9BRS8 491 aaKnown RBP10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 L1RE1Q9UN81 338 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 PEX19P40855 299 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 RAB27AP51159 221 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 GCKRQ14397 625 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 C9orf131Q5VYM1 1079 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 CDCA2Q69YH5 1023 aaPredicted RBP10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 NFXL1Q6ZNB6 911 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 LRP10Q7Z4F1 713 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 DRAXINQ8NBI3 349 aaPredicted RBP10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 DDX11Q96FC9 970 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 FAM163AQ96GL9 167 aaPredicted RBP10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 CCDC8Q9H0W5 538 aaPredicted RBP10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 LMCD1Q9NZU5 365 aa10.6□□□□□ -0.71
SMARCAL1-202ENST00000358207 GLTPD2A6NH11 291 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 NFKBIEO00221 500 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 PECAM1P16284 738 aaPredicted RBP10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 HOXA10P31260 410 aaPredicted RBP10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 TLDC1Q6P9B6 456 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 HDXQ7Z353 690 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 CNKSR1Q969H4 720 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 LRRCC1Q9C099 1032 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 DDX20Q9UHI6 824 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 ZNF652Q9Y2D9 606 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 PRELPP51888 382 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 MAP3K9P80192 1104 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 PPP2R3AQ06190 1150 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 BRD3Q15059 726 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 IFFO2Q5TF58 517 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 FAM71BQ8TC56 605 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 METTL22Q9BUU2 404 aaPredicted RBP10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 EHD4Q9H223 541 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 A0A087WWV3 80 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 TXLNAP40222 546 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 RBBP5Q15291 538 aaKnown RBP10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 MYSM1Q5VVJ2 828 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 POTEDQ86YR6 584 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 CCDC102AQ96A19 550 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms