RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 WASF1Q92558 559 aa23.41■■□□□ 1.34
COL13A1-202ENST00000357811 PSDA5PKW4 1024 aaPredicted RBP23.41■■□□□ 1.34
COL13A1-202ENST00000357811 CBFA2T2O43439 604 aa23.41■■□□□ 1.34
COL13A1-202ENST00000357811 DEXIO95424 95 aa23.41■■□□□ 1.34
COL13A1-202ENST00000357811 EIF5P55010 431 aaKnown RBP23.41■■□□□ 1.34
COL13A1-202ENST00000357811 MED15Q96RN5 788 aa23.41■■□□□ 1.34
COL13A1-202ENST00000357811 A0A087X0B3 334 aa23.4■■□□□ 1.34
COL13A1-202ENST00000357811 NMT2O60551 498 aa23.4■■□□□ 1.34
COL13A1-202ENST00000357811 ETF1P62495 437 aaKnown RBP23.4■■□□□ 1.34
COL13A1-202ENST00000357811 ZNF174Q15697 407 aa23.4■■□□□ 1.34
COL13A1-202ENST00000357811 ARHGAP29Q52LW3 1261 aa23.4■■□□□ 1.34
COL13A1-202ENST00000357811 RILPL1Q5EBL4 403 aa23.4■■□□□ 1.34
COL13A1-202ENST00000357811 CCDC87Q9NVE4 849 aa23.4■■□□□ 1.34
COL13A1-202ENST00000357811 MAGEB6P1A0A0J9YX57 407 aa23.39■■□□□ 1.34
COL13A1-202ENST00000357811 TOGARAM2Q6ZUX3 1019 aa23.39■■□□□ 1.34
COL13A1-202ENST00000357811 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.39■■□□□ 1.34
COL13A1-202ENST00000357811 ITPK1Q13572 414 aa23.39■■□□□ 1.33
COL13A1-202ENST00000357811 KARSQ15046 597 aaKnown RBP23.39■■□□□ 1.33
COL13A1-202ENST00000357811 ZNF446Q9NWS9 450 aa23.39■■□□□ 1.33
COL13A1-202ENST00000357811 MTMR7Q9Y216 660 aa23.39■■□□□ 1.33
COL13A1-202ENST00000357811 MTF1Q14872 753 aa23.38■■□□□ 1.33
COL13A1-202ENST00000357811 ENAHQ8N8S7 591 aaPredicted RBP23.38■■□□□ 1.33
COL13A1-202ENST00000357811 NUP98P52948 1817 aa23.38■■□□□ 1.33
COL13A1-202ENST00000357811 KIF2AO00139 706 aaPredicted RBP23.38■■□□□ 1.33
COL13A1-202ENST00000357811 UTP14CQ5TAP6 766 aaKnown RBP23.38■■□□□ 1.33
COL13A1-202ENST00000357811 ZNF771Q7L3S4 317 aaPredicted RBP23.38■■□□□ 1.33
COL13A1-202ENST00000357811 CARD6Q9BX69 1037 aa23.38■■□□□ 1.33
COL13A1-202ENST00000357811 XIRP1Q702N8 1843 aaKnown RBP23.38■■□□□ 1.33
COL13A1-202ENST00000357811 STK36Q9NRP7 1315 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 TRIM65Q6PJ69 517 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 IRX2Q9BZI1 471 aaPredicted RBP23.37■■□□□ 1.33
COL13A1-202ENST00000357811 FOXP1Q9H334 677 aaPredicted RBP23.37■■□□□ 1.33
COL13A1-202ENST00000357811 FAM237AA0A1B0GTK4 181 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 FAM47AQ5JRC9 791 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 REXO1L1PQ8IX06 675 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 BAG1Q99933 345 aaPredicted RBP23.37■■□□□ 1.33
COL13A1-202ENST00000357811 HOOK1Q9UJC3 728 aaKnown RBP23.37■■□□□ 1.33
COL13A1-202ENST00000357811 MYH3P11055 1940 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 GOLGB1Q14789 3259 aaKnown RBP23.37■■□□□ 1.33
COL13A1-202ENST00000357811 ITGB4P16144 1822 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 TEX33O43247 280 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 VEGFAP15692 232 aaPredicted RBP23.37■■□□□ 1.33
COL13A1-202ENST00000357811 KLRK1P26718 216 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 ESR2Q92731 530 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 WDR24Q96S15 920 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 PPP2R2CQ9Y2T4 447 aa23.37■■□□□ 1.33
COL13A1-202ENST00000357811 CAMTA2O94983 1202 aa23.36■■□□□ 1.33
COL13A1-202ENST00000357811 GNG11P61952 73 aa23.36■■□□□ 1.33
COL13A1-202ENST00000357811 IFIT1BQ5T764 474 aaKnown RBP23.36■■□□□ 1.33
COL13A1-202ENST00000357811 L2HGDHQ9H9P8 463 aa23.36■■□□□ 1.33
COL13A1-202ENST00000357811 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.36■■□□□ 1.33
COL13A1-202ENST00000357811 LOC102724428A0A0B4J2F2 783 aa23.36■■□□□ 1.33
COL13A1-202ENST00000357811 CCDC196A0A1B0GTZ2 297 aa23.36■■□□□ 1.33
COL13A1-202ENST00000357811 SIK1P57059 783 aa23.36■■□□□ 1.33
COL13A1-202ENST00000357811 MNS1Q8NEH6 495 aa23.36■■□□□ 1.33
COL13A1-202ENST00000357811 A0A0U1RQJ8 604 aa23.35■■□□□ 1.33
COL13A1-202ENST00000357811 ACTN4O43707 911 aaKnown RBP23.35■■□□□ 1.33
COL13A1-202ENST00000357811 GNAT2P19087 354 aa23.35■■□□□ 1.33
COL13A1-202ENST00000357811 ATRIPQ8WXE1 791 aa23.35■■□□□ 1.33
COL13A1-202ENST00000357811 BLZF1Q9H2G9 400 aa23.35■■□□□ 1.33
COL13A1-202ENST00000357811 RNF41Q9H4P4 317 aaPredicted RBP23.35■■□□□ 1.33
COL13A1-202ENST00000357811 ZSWIM4Q9H7M6 989 aa23.35■■□□□ 1.33
COL13A1-202ENST00000357811 VWA3AA6NCI4 1184 aa23.35■■□□□ 1.33
COL13A1-202ENST00000357811 TRIM75PA6NK02 468 aa23.35■■□□□ 1.33
COL13A1-202ENST00000357811 TMEM139Q8IV31 216 aa23.35■■□□□ 1.33
COL13A1-202ENST00000357811 BBXQ8WY36 941 aaPredicted RBP23.35■■□□□ 1.33
COL13A1-202ENST00000357811 SYMPKQ92797 1274 aaKnown RBP23.35■■□□□ 1.33
COL13A1-202ENST00000357811 SRPRBQ9Y5M8 271 aaKnown RBP23.35■■□□□ 1.33
COL13A1-202ENST00000357811 ADAMTS3O15072 1205 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 KCNQ2O43526 872 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 CD44P16070 742 aaKnown RBP23.34■■□□□ 1.33
COL13A1-202ENST00000357811 GTF2E1P29083 439 aaPredicted RBP23.34■■□□□ 1.33
COL13A1-202ENST00000357811 CDC25AP30304 524 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 ERFEQ4G0M1 354 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 KCND1Q9NSA2 647 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 LRP6O75581 1613 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 USP17L12C9JPN9 530 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 USP17L21D6R901 530 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 NTSR2O95665 410 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 PKN1Q16512 942 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 CCDC93Q567U6 631 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 TFCP2L1Q9NZI6 479 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 DDX60Q8IY21 1712 aaKnown RBP23.34■■□□□ 1.33
COL13A1-202ENST00000357811 MORC3Q14149 939 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 SPECC1LQ69YQ0 1117 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 TC2NQ8N9U0 490 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 UBXN4Q92575 508 aa23.34■■□□□ 1.33
COL13A1-202ENST00000357811 ZSCAN10Q96SZ4 725 aaPredicted RBP23.34■■□□□ 1.33
COL13A1-202ENST00000357811 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.33
COL13A1-202ENST00000357811 CLCN6P51797 869 aa23.33■■□□□ 1.33
COL13A1-202ENST00000357811 SEC23AQ15436 765 aa23.33■■□□□ 1.33
COL13A1-202ENST00000357811 ECM29Q5VYK3 1845 aa23.33■■□□□ 1.33
COL13A1-202ENST00000357811 LZTFL1Q9NQ48 299 aa23.33■■□□□ 1.32
COL13A1-202ENST00000357811 AATFQ9NY61 560 aaKnown RBP eCLIP23.33■■□□□ 1.32
COL13A1-202ENST00000357811 MAPK8IP1Q9UQF2 711 aa23.33■■□□□ 1.32
COL13A1-202ENST00000357811 MORC2Q9Y6X9 1032 aaPredicted RBP23.32■■□□□ 1.32
COL13A1-202ENST00000357811 COL4A1P02462 1669 aa23.32■■□□□ 1.32
COL13A1-202ENST00000357811 SOWAHDA6NJG2 315 aa23.32■■□□□ 1.32
COL13A1-202ENST00000357811 CYP2D6P10635 497 aa23.32■■□□□ 1.32
COL13A1-202ENST00000357811 DDB1Q16531 1140 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms