RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 FLAD1Q8NFF5 587 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-205ENST00000357568 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
CAPN3-205ENST00000357568 A0A087WZG4 1122 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 KIF28PB7ZC32 967 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 SEMA3EO15041 775 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 AARSP49588 968 aaKnown RBP eCLIP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 MDM2Q00987 491 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 TTC31Q49AM3 519 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 DDX46Q7L014 1031 aaKnown RBP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 PDE11AQ9HCR9 933 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 TTF2Q9UNY4 1162 aaKnown RBP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 AKR1B15C9JRZ8 316 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 POLR3DP05423 398 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 NR1I3Q14994 352 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 IMMTQ16891 758 aaKnown RBP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 HSP90B2PQ58FF3 399 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 KANK3Q6NY19 840 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 SUGP1Q8IWZ8 645 aaKnown RBP12.13□□□□□ -0.47
CAPN3-205ENST00000357568 VPS18Q9P253 973 aa12.13□□□□□ -0.47
CAPN3-205ENST00000357568 AFDNP55196 1824 aaKnown RBP12.12□□□□□ -0.47
CAPN3-205ENST00000357568 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 CPLX1O14810 134 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 TRIM66O15016 1216 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 RGL2O15211 777 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 SARSP49591 514 aaKnown RBP12.12□□□□□ -0.47
CAPN3-205ENST00000357568 SLC15A2Q16348 729 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 KLHDC4Q8TBB5 520 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 ITIH6Q6UXX5 1313 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 KLF18A0A0U1RQI7 1052 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 GUCY2CP25092 1073 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 KCNQ4P56696 695 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 EFCAB13Q8IY85 973 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 CNNM3Q8NE01 707 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 EPC1Q9H2F5 836 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 KCNG1Q9UIX4 513 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
CAPN3-205ENST00000357568 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
CAPN3-205ENST00000357568 BCORQ6W2J9 1755 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 STK36Q9NRP7 1315 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 PRC1O43663 620 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 A1BGP04217 495 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 EIF5P55010 431 aaKnown RBP12.11□□□□□ -0.47
CAPN3-205ENST00000357568 PNOCQ13519 176 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 MORC3Q14149 939 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 CPLX2Q6PUV4 134 aaKnown RBP12.11□□□□□ -0.47
CAPN3-205ENST00000357568 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
CAPN3-205ENST00000357568 NCOA7Q8NI08 942 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 KCNH3Q9ULD8 1083 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 ARFGEF2Q9Y6D5 1785 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 CTAGE9A4FU28 777 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 NBPF26B4DH59 902 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 PPFIA4O75335 1185 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 GTF2A1P52655 376 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-205ENST00000357568 CASP7P55210 303 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 ZNF827Q17R98 1081 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 NBPF10Q6P3W6 841 aaKnown RBP12.11□□□□□ -0.47
CAPN3-205ENST00000357568 NBPF15Q8N660 670 aa12.11□□□□□ -0.47
CAPN3-205ENST00000357568 MRPL44Q9H9J2 332 aaKnown RBP12.11□□□□□ -0.47
CAPN3-205ENST00000357568 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
CAPN3-205ENST00000357568 IQSEC3Q9UPP2 1182 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-205ENST00000357568 EIF3CLB5ME19 914 aaKnown RBP12.1□□□□□ -0.47
CAPN3-205ENST00000357568 GNPATO15228 680 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 PBX1P40424 430 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 IL15P40933 162 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-205ENST00000357568 PLCD1P51178 756 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 CASP8Q14790 479 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 VPS37DQ86XT2 251 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 CTAGE1Q96RT6 745 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 EIF3CQ99613 913 aaKnown RBP12.1□□□□□ -0.47
CAPN3-205ENST00000357568 MYD88Q99836 296 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 MAN1B1Q9UKM7 699 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 NFE2L3Q9Y4A8 694 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 SCN7AQ01118 1682 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 GOLIM4O00461 696 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 CIAO1O76071 339 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 SWT1Q5T5J6 900 aaKnown RBP12.1□□□□□ -0.47
CAPN3-205ENST00000357568 LRP10Q7Z4F1 713 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 PDILTQ8N807 584 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 KRI1Q8N9T8 703 aaKnown RBP12.1□□□□□ -0.47
CAPN3-205ENST00000357568 SPATA20Q8TB22 786 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
CAPN3-205ENST00000357568 ABCB6Q9NP58 842 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 NID2Q14112 1375 aa12.1□□□□□ -0.47
CAPN3-205ENST00000357568 CASZ1Q86V15 1759 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 CTAGE15A4D2H0 777 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 CTAGE8P0CG41 777 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 BMP6P22004 513 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 PDE4BQ07343 736 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 POSTNQ15063 836 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 MAP9Q49MG5 647 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 OTUD7BQ6GQQ9 843 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 CTAGE6Q86UF2 777 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms