RNA–Protein interactions for RNA: ENST00000357037.5

CAVIN1-201, Transcript of caveolae associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN1-201ENST00000357037 NEMFO60524 1076 aa17.19■□□□□ 0.34
CAVIN1-201ENST00000357037 LIFRP42702 1097 aa17.19■□□□□ 0.34
CAVIN1-201ENST00000357037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 ADGRA1Q86SQ6 560 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 CDK5RAP3Q96JB5 506 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 CSRNP2Q9H175 543 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 SEC63Q9UGP8 760 aaKnown RBP17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 MMP1P03956 469 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 CCT6AP40227 531 aaKnown RBP17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 KRBA2Q6ZNG9 492 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 TEX11Q8IYF3 940 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 GRIN1Q05586 938 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 TTC38Q5R3I4 469 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 SHC4Q6S5L8 630 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 SLC44A5Q8NCS7 719 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 ZNF622Q969S3 477 aaKnown RBP eCLIP17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 EPSTI1Q96J88 318 aa17.18■□□□□ 0.34
CAVIN1-201ENST00000357037 FOXP2O15409 715 aa17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 IGSF3O75054 1194 aa17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 LDHCP07864 332 aa17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 CCDC96Q2M329 555 aa17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 CCDC47Q96A33 483 aaKnown RBP17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 ENAHQ8N8S7 591 aaPredicted RBP17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 BCL9O00512 1426 aa17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 NAPAP54920 295 aa17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 KARSQ15046 597 aaKnown RBP17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 BCL2L12Q9HB09 334 aa17.17■□□□□ 0.34
CAVIN1-201ENST00000357037 IQCB1Q15051 598 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 USP49Q70CQ1 688 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 GPIHBP1Q8IV16 184 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 NBPF3Q9H094 633 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 ERCC3P19447 782 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 ADKP55263 362 aaKnown RBP17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 MTERF4Q7Z6M4 381 aaKnown RBP17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 CCDC150Q8NCX0 1101 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 AGXT2Q9BYV1 514 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 USP27XA6NNY8 438 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 N4BP3O15049 544 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 STAT6P42226 847 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 GNG11P61952 73 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 ST5P78524 1137 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 NAA30Q147X3 362 aaPredicted RBP17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
CAVIN1-201ENST00000357037 LMO7Q8WWI1 1683 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 LETM2Q2VYF4 491 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 ARHGEF1Q92888 912 aaKnown RBP17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 MROH7-TTC4A0A0A0MT08 1334 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 CALM1P0DP23 149 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 CALM2P0DP24 149 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 CALM3P0DP25 149 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 FGFR2P21802 821 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 PTGDRQ13258 359 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 DHX40Q8IX18 779 aaKnown RBP17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 MRFAP1L1Q96HT8 127 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 KIF1AQ12756 1690 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 IDEP14735 1019 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 MAGEC2Q9UBF1 373 aaPredicted RBP17.15■□□□□ 0.34
CAVIN1-201ENST00000357037 ENGASEQ8NFI3 743 aa17.14■□□□□ 0.33
CAVIN1-201ENST00000357037 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
CAVIN1-201ENST00000357037 PLA2G4DQ86XP0 818 aa17.14■□□□□ 0.33
CAVIN1-201ENST00000357037 NUP88Q99567 741 aaPredicted RBP17.14■□□□□ 0.33
CAVIN1-201ENST00000357037 GTF2IP78347 998 aa17.14■□□□□ 0.33
CAVIN1-201ENST00000357037 EVX2Q03828 476 aa17.14■□□□□ 0.33
CAVIN1-201ENST00000357037 MFSD14BQ5SR56 506 aa17.14■□□□□ 0.33
CAVIN1-201ENST00000357037 KANK3Q6NY19 840 aa17.14■□□□□ 0.33
CAVIN1-201ENST00000357037 VPS16Q9H269 839 aa17.14■□□□□ 0.33
CAVIN1-201ENST00000357037 SYMPKQ92797 1274 aaKnown RBP17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 ZNF287Q9HBT7 754 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 RBM28Q9NW13 759 aaKnown RBP17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 ABCC12Q96J65 1359 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 CCDC178Q5BJE1 867 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 GPCPD1Q9NPB8 672 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 LZTFL1Q9NQ48 299 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 TCRBV5S4A2TA0A5A2 114 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 IPO7O95373 1038 aaKnown RBP17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 JAKMIP3Q5VZ66 844 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 SGMS1Q86VZ5 419 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 UBXN4Q92575 508 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 CTNND2Q9UQB3 1225 aa17.13■□□□□ 0.33
CAVIN1-201ENST00000357037 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 RBM6P78332 1123 aaKnown RBP17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 CTR9Q6PD62 1173 aa17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 UBA5Q9GZZ9 404 aa17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 THRAP3Q9Y2W1 955 aaKnown RBP17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 PPP6R2O75170 966 aa17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 TEX35Q5T0J7 233 aa17.12■□□□□ 0.33
CAVIN1-201ENST00000357037 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms