RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 PTPN22Q9Y2R2 807 aa20.69■□□□□ 0.9
NCL-202ENST00000356936 C19orf81C9J6K1 198 aa20.68■□□□□ 0.9
NCL-202ENST00000356936 GDF11O95390 407 aa20.68■□□□□ 0.9
NCL-202ENST00000356936 PLCD1P51178 756 aa20.68■□□□□ 0.9
NCL-202ENST00000356936 CERKLQ49MI3 558 aaPredicted RBP20.68■□□□□ 0.9
NCL-202ENST00000356936 SH3D19Q5HYK7 790 aa20.68■□□□□ 0.9
NCL-202ENST00000356936 TSHZ3Q63HK5 1081 aa20.68■□□□□ 0.9
NCL-202ENST00000356936 SMCR8Q8TEV9 937 aaPredicted RBP20.68■□□□□ 0.9
NCL-202ENST00000356936 PHIPQ8WWQ0 1821 aa20.68■□□□□ 0.9
NCL-202ENST00000356936 ADGRA2Q96PE1 1338 aa20.68■□□□□ 0.9
NCL-202ENST00000356936 MYH1P12882 1939 aa20.67■□□□□ 0.9
NCL-202ENST00000356936 CYP2C8P10632 490 aa20.67■□□□□ 0.9
NCL-202ENST00000356936 HMGCS2P54868 508 aa20.67■□□□□ 0.9
NCL-202ENST00000356936 BACE1P56817 501 aa20.67■□□□□ 0.9
NCL-202ENST00000356936 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
NCL-202ENST00000356936 TMOD4Q9NZQ9 345 aa20.67■□□□□ 0.9
NCL-202ENST00000356936 ATAD5Q96QE3 1844 aa20.67■□□□□ 0.9
NCL-202ENST00000356936 USP17L10C9JJH3 530 aa20.66■□□□□ 0.9
NCL-202ENST00000356936 RNF113AO15541 343 aaKnown RBP20.66■□□□□ 0.9
NCL-202ENST00000356936 GH2P01242 217 aa20.66■□□□□ 0.9
NCL-202ENST00000356936 PRMT2P55345 433 aa20.66■□□□□ 0.9
NCL-202ENST00000356936 MTMR2Q13614 643 aa20.66■□□□□ 0.9
NCL-202ENST00000356936 ABCB5Q2M3G0 1257 aa20.66■□□□□ 0.9
NCL-202ENST00000356936 SLFNL1Q499Z3 407 aa20.66■□□□□ 0.9
NCL-202ENST00000356936 PI4K2BQ8TCG2 481 aa20.66■□□□□ 0.9
NCL-202ENST00000356936 APPBP2Q92624 585 aa20.66■□□□□ 0.9
NCL-202ENST00000356936 DDX60LQ5H9U9 1706 aaKnown RBP20.65■□□□□ 0.9
NCL-202ENST00000356936 OSBPP22059 807 aa20.65■□□□□ 0.9
NCL-202ENST00000356936 JAG1P78504 1218 aa20.65■□□□□ 0.9
NCL-202ENST00000356936 GABPAQ06546 454 aa20.65■□□□□ 0.9
NCL-202ENST00000356936 TREML2Q5T2D2 321 aa20.65■□□□□ 0.9
NCL-202ENST00000356936 PUS7LQ9H0K6 701 aaKnown RBP20.65■□□□□ 0.9
NCL-202ENST00000356936 SWAP70Q9UH65 585 aa20.65■□□□□ 0.9
NCL-202ENST00000356936 SUPT16HQ9Y5B9 1047 aaKnown RBP20.65■□□□□ 0.9
NCL-202ENST00000356936 SLC4A4Q9Y6R1 1079 aa20.65■□□□□ 0.9
NCL-202ENST00000356936 NAV1Q8NEY1 1877 aa20.64■□□□□ 0.9
NCL-202ENST00000356936 PRKAB2O43741 272 aa20.64■□□□□ 0.89
NCL-202ENST00000356936 BCRP11274 1271 aa20.64■□□□□ 0.89
NCL-202ENST00000356936 HOXD10P28358 340 aa20.64■□□□□ 0.89
NCL-202ENST00000356936 SHMT1P34896 483 aa20.64■□□□□ 0.89
NCL-202ENST00000356936 RGS19P49795 217 aa20.64■□□□□ 0.89
NCL-202ENST00000356936 OTUD7AQ8TE49 926 aaPredicted RBP20.64■□□□□ 0.89
NCL-202ENST00000356936 CHGBP05060 677 aa20.63■□□□□ 0.89
NCL-202ENST00000356936 PSMC4P43686 418 aa20.63■□□□□ 0.89
NCL-202ENST00000356936 GCLCP48506 637 aaPredicted RBP20.63■□□□□ 0.89
NCL-202ENST00000356936 RAB3GAP1Q15042 981 aa20.63■□□□□ 0.89
NCL-202ENST00000356936 EXOC6Q8TAG9 804 aa20.63■□□□□ 0.89
NCL-202ENST00000356936 PTPRFP10586 1907 aa20.63■□□□□ 0.89
NCL-202ENST00000356936 SALL3Q9BXA9 1300 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 FMNL1O95466 1100 aaPredicted RBP20.62■□□□□ 0.89
NCL-202ENST00000356936 GNAT2P19087 354 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 FCGRTP55899 365 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 CAP1Q01518 475 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 SHROOM1Q2M3G4 852 aaPredicted RBP20.62■□□□□ 0.89
NCL-202ENST00000356936 GIMAP6Q6P9H5 292 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 USP17L2Q6R6M4 530 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 NBPF11Q86T75 865 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 STRBPQ96SI9 672 aaKnown RBP20.62■□□□□ 0.89
NCL-202ENST00000356936 FEZ1Q99689 392 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 FSD1Q9BTV5 496 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 ARHGAP39Q9C0H5 1083 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 ARPP21Q9UBL0 812 aaPredicted RBP20.62■□□□□ 0.89
NCL-202ENST00000356936 STAP2Q9UGK3 403 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 MYH7P12883 1935 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 LOC285556D6RIA3 1793 aa20.62■□□□□ 0.89
NCL-202ENST00000356936 USP17L12C9JPN9 530 aa20.61■□□□□ 0.89
NCL-202ENST00000356936 USP17L21D6R901 530 aa20.61■□□□□ 0.89
NCL-202ENST00000356936 HOXA7P31268 230 aaPredicted RBP20.61■□□□□ 0.89
NCL-202ENST00000356936 USP14P54578 494 aa20.61■□□□□ 0.89
NCL-202ENST00000356936 IRX3P78415 501 aaPredicted RBP20.61■□□□□ 0.89
NCL-202ENST00000356936 C12orf60Q5U649 245 aa20.61■□□□□ 0.89
NCL-202ENST00000356936 SMC5Q8IY18 1101 aa20.61■□□□□ 0.89
NCL-202ENST00000356936 OSBP2Q969R2 916 aa20.61■□□□□ 0.89
NCL-202ENST00000356936 MPHOSPH10O00566 681 aaKnown RBP20.6■□□□□ 0.89
NCL-202ENST00000356936 CYP2D6P10635 497 aa20.6■□□□□ 0.89
NCL-202ENST00000356936 FAM110CQ1W6H9 321 aa20.6■□□□□ 0.89
NCL-202ENST00000356936 SLC9C1Q4G0N8 1177 aa20.6■□□□□ 0.89
NCL-202ENST00000356936 TRIM47Q96LD4 638 aa20.6■□□□□ 0.89
NCL-202ENST00000356936 CCDC17Q96LX7 622 aa20.6■□□□□ 0.89
NCL-202ENST00000356936 KIAA1683Q9H0B3 1180 aa20.6■□□□□ 0.89
NCL-202ENST00000356936 ASCC2Q9H1I8 757 aaPredicted RBP20.6■□□□□ 0.89
NCL-202ENST00000356936 PTCH2Q9Y6C5 1203 aa20.6■□□□□ 0.89
NCL-202ENST00000356936 PDE1AP54750 535 aa20.59■□□□□ 0.89
NCL-202ENST00000356936 SOX10P56693 466 aa20.59■□□□□ 0.89
NCL-202ENST00000356936 MLLT1Q03111 559 aaPredicted RBP20.59■□□□□ 0.89
NCL-202ENST00000356936 CTR9Q6PD62 1173 aa20.59■□□□□ 0.89
NCL-202ENST00000356936 TMEM179Q6ZVK1 233 aa20.59■□□□□ 0.89
NCL-202ENST00000356936 ANKRD13CQ8N6S4 541 aa20.59■□□□□ 0.89
NCL-202ENST00000356936 ARMC5Q96C12 935 aa20.59■□□□□ 0.89
NCL-202ENST00000356936 C12orf42Q96LP6 360 aa20.59■□□□□ 0.89
NCL-202ENST00000356936 SRRDQ9UH36 339 aa20.59■□□□□ 0.89
NCL-202ENST00000356936 GPAA1O43292 621 aa20.58■□□□□ 0.89
NCL-202ENST00000356936 SBK1Q52WX2 424 aa20.58■□□□□ 0.89
NCL-202ENST00000356936 C16orf86Q6ZW13 317 aa20.58■□□□□ 0.89
NCL-202ENST00000356936 TICAM2Q86XR7 235 aa20.58■□□□□ 0.89
NCL-202ENST00000356936 GTF3C2Q8WUA4 911 aaPredicted RBP20.58■□□□□ 0.89
NCL-202ENST00000356936 EVI5LQ96CN4 794 aa20.58■□□□□ 0.89
NCL-202ENST00000356936 DYNLL2Q96FJ2 89 aa20.58■□□□□ 0.89
NCL-202ENST00000356936 GSG1L2A8MUP6 293 aa20.57■□□□□ 0.88
NCL-202ENST00000356936 CTGFP29279 349 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms