RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ERO1BQ86YB8 467 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 JMYQ8N9B5 988 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 SLC10A4Q96EP9 437 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 CNNM2Q9H8M5 875 aa18.97■□□□□ 0.63
FDPS-201ENST00000356657 RBM8AQ9Y5S9 174 aaKnown RBP18.97■□□□□ 0.63
FDPS-201ENST00000356657 GREB1LQ9C091 1923 aaPredicted RBP18.96■□□□□ 0.63
FDPS-201ENST00000356657 SPDYE5A6NIY4 337 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 FAM196BA6NMK8 535 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 INPP5BP32019 993 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 PPATQ06203 517 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 ABCB5Q2M3G0 1257 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 CYP4F22Q6NT55 531 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 MFSD6Q6ZSS7 791 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 TMEM179Q6ZVK1 233 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 DYNLL2Q96FJ2 89 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 PLIN4Q96Q06 1357 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.96■□□□□ 0.63
FDPS-201ENST00000356657 SNCAIPQ9Y6H5 919 aa18.96■□□□□ 0.63
FDPS-201ENST00000356657 WDR33Q9C0J8 1336 aaKnown RBP18.95■□□□□ 0.62
FDPS-201ENST00000356657 MOB2Q70IA6 237 aa18.95■□□□□ 0.62
FDPS-201ENST00000356657 ZNF444Q8N0Y2 327 aaPredicted RBP18.95■□□□□ 0.62
FDPS-201ENST00000356657 ZKSCAN4Q969J2 545 aaPredicted RBP18.95■□□□□ 0.62
FDPS-201ENST00000356657 CAPNS2Q96L46 248 aa18.95■□□□□ 0.62
FDPS-201ENST00000356657 AS3MTQ9HBK9 375 aa18.95■□□□□ 0.62
FDPS-201ENST00000356657 ZBTB21Q9ULJ3 1066 aa18.95■□□□□ 0.62
FDPS-201ENST00000356657 ZKSCAN1P17029 563 aaPredicted RBP18.94■□□□□ 0.62
FDPS-201ENST00000356657 RASA1P20936 1047 aa18.94■□□□□ 0.62
FDPS-201ENST00000356657 ZNF157P51786 506 aaPredicted RBP18.94■□□□□ 0.62
FDPS-201ENST00000356657 NECTIN1Q15223 517 aa18.94■□□□□ 0.62
FDPS-201ENST00000356657 SLC44A5Q8NCS7 719 aa18.94■□□□□ 0.62
FDPS-201ENST00000356657 KRT23Q9C075 422 aa18.94■□□□□ 0.62
FDPS-201ENST00000356657 FZD1Q9UP38 647 aa18.94■□□□□ 0.62
FDPS-201ENST00000356657 PHIPQ8WWQ0 1821 aa18.94■□□□□ 0.62
FDPS-201ENST00000356657 CYP21A2P08686 494 aa18.93■□□□□ 0.62
FDPS-201ENST00000356657 SLC10A3P09131 477 aa18.93■□□□□ 0.62
FDPS-201ENST00000356657 MCCP23508 829 aa18.93■□□□□ 0.62
FDPS-201ENST00000356657 TRDNQ13061 729 aa18.93■□□□□ 0.62
FDPS-201ENST00000356657 NOGQ13253 232 aa18.93■□□□□ 0.62
FDPS-201ENST00000356657 PPIL2Q13356 520 aa18.93■□□□□ 0.62
FDPS-201ENST00000356657 REM2Q8IYK8 340 aaPredicted RBP18.93■□□□□ 0.62
FDPS-201ENST00000356657 ESR2Q92731 530 aa18.93■□□□□ 0.62
FDPS-201ENST00000356657 USP17L5A8MUK1 530 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 PTPRAP18433 802 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 HAND2P61296 217 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 EVX2Q03828 476 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 CTDSPL2Q05D32 466 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 KRT32Q14532 448 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 TSGA10IPQ3SY00 556 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 CLMNQ96JQ2 1002 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 NBPF3Q9H094 633 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 KANSL2Q9H9L4 492 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 ELP3Q9H9T3 547 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 SYNPO2Q9UMS6 1093 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 PCNTO95613 3336 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 PTPRFP10586 1907 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 THSD7BQ9C0I4 1608 aa18.92■□□□□ 0.62
FDPS-201ENST00000356657 GDF11O95390 407 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 GH2P01242 217 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 TSPY3P0CV98 308 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 TSPY8P0CW00 308 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 C8orf34Q49A92 452 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 CCDC178Q5BJE1 867 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 CREB3L3Q68CJ9 461 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 RASAL3Q86YV0 1011 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 TBC1D10CQ8IV04 446 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 OPTNQ96CV9 577 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 WNK4Q96J92 1243 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 WDR18Q9BV38 432 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 SH2D4AQ9H788 454 aa18.91■□□□□ 0.62
FDPS-201ENST00000356657 TSPY2A6NKD2 308 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 MPHOSPH10O00566 681 aaKnown RBP18.9■□□□□ 0.62
FDPS-201ENST00000356657 CXCL11O14625 94 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 SLURP2P0DP57 97 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 HSPA4P34932 840 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 SPRYD7Q5W111 196 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 NEDD1Q8NHV4 660 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 SMIM22K7EJ46 135 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 SLC27A2O14975 620 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 HSPA1AP0DMV8 641 aaKnown RBP18.9■□□□□ 0.62
FDPS-201ENST00000356657 HSPA1BP0DMV9 641 aaKnown RBP18.9■□□□□ 0.62
FDPS-201ENST00000356657 AKR1B1P15121 316 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 INHBEP58166 350 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 RRP1BQ14684 758 aaKnown RBP18.9■□□□□ 0.62
FDPS-201ENST00000356657 RALYLQ86SE5 291 aaKnown RBP18.9■□□□□ 0.62
FDPS-201ENST00000356657 ZNF280CQ8ND82 737 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 NCOA7Q8NI08 942 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 KCNB2Q92953 911 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 TOMM22Q9NS69 142 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 TCP11L1Q9NUJ3 509 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 KCNH4Q9UQ05 1017 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 ZHX2Q9Y6X8 837 aa18.9■□□□□ 0.62
FDPS-201ENST00000356657 RANBP6O60518 1105 aaKnown RBP18.89■□□□□ 0.61
FDPS-201ENST00000356657 PRDM1O75626 825 aa18.89■□□□□ 0.61
FDPS-201ENST00000356657 MAP2K2P36507 400 aa18.89■□□□□ 0.61
FDPS-201ENST00000356657 GTF2A2P52657 109 aa18.89■□□□□ 0.61
FDPS-201ENST00000356657 RAB3GAP1Q15042 981 aa18.89■□□□□ 0.61
FDPS-201ENST00000356657 IQCA1Q86XH1 822 aa18.89■□□□□ 0.61
FDPS-201ENST00000356657 OTUD5Q96G74 571 aa18.89■□□□□ 0.61
FDPS-201ENST00000356657 MTA3Q9BTC8 594 aa18.89■□□□□ 0.61
FDPS-201ENST00000356657 USP26Q9BXU7 913 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms