RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 IFNB1P01574 187 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 NOP14P78316 857 aaKnown RBP19.11■□□□□ 0.65
COL27A1-201ENST00000356083 DYMQ7RTS9 669 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 PALM2Q8IXS6 379 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 CCDC105Q8IYK2 499 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 CSADQ9Y600 493 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 PIK3R4Q99570 1358 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 H7C1D1 291 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 COG7P83436 770 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL27A1-201ENST00000356083 NME8Q8N427 588 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 TBC1D2Q9BYX2 928 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 ANLNQ9NQW6 1124 aa19.11■□□□□ 0.65
COL27A1-201ENST00000356083 POLR2DO15514 142 aaKnown RBP19.11■□□□□ 0.65
COL27A1-201ENST00000356083 NUMA1Q14980 2115 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 TESPA1A2RU30 521 aaPredicted RBP19.1■□□□□ 0.65
COL27A1-201ENST00000356083 HNRNPCL2B2RXH8 293 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 HNRNPCL1O60812 293 aaKnown RBP19.1■□□□□ 0.65
COL27A1-201ENST00000356083 NUCB1Q02818 461 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 ALDH1L2Q3SY69 923 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 MYSM1Q5VVJ2 828 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 TSPYL2Q9H2G4 693 aaPredicted RBP19.1■□□□□ 0.65
COL27A1-201ENST00000356083 POLKQ9UBT6 870 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 RAPH1Q70E73 1250 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 RBM46Q8TBY0 533 aaKnown RBP19.1■□□□□ 0.65
COL27A1-201ENST00000356083 TMX3Q96JJ7 454 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 A0A1B0GVL5 298 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 OPHN1O60890 802 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 VPS41P49754 854 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 PHEXP78562 749 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 NBPF11Q86T75 865 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 TPH2Q8IWU9 490 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 NUB1Q9Y5A7 615 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 ARHGAP27Q6ZUM4 889 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 ZNF277Q9NRM2 450 aaPredicted RBP19.1■□□□□ 0.65
COL27A1-201ENST00000356083 MOSPD1Q9UJG1 213 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 TRIM27P14373 513 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 ARHGEF16Q5VV41 709 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 CEP128Q6ZU80 1094 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 ALKBH8Q96BT7 664 aaKnown RBP19.1■□□□□ 0.65
COL27A1-201ENST00000356083 STK32BQ9NY57 414 aa19.1■□□□□ 0.65
COL27A1-201ENST00000356083 GNAT2P19087 354 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 ATICP31939 592 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 SLC9A5Q14940 896 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 EXOC7Q9UPT5 735 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 BNIP3LO60238 219 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 ECE1P42892 770 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 TTC22Q5TAA0 569 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 KLHL7Q8IXQ5 586 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 CNBD1Q8NA66 436 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 LGSNQ5TDP6 509 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 CDC26Q8NHZ8 85 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 MLXIPQ9HAP2 919 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 PIK3AP1Q6ZUJ8 805 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 CADPS2Q86UW7 1296 aa19.09■□□□□ 0.65
COL27A1-201ENST00000356083 LRRC59Q96AG4 307 aaKnown RBP19.09■□□□□ 0.65
COL27A1-201ENST00000356083 HSPA2P54652 639 aa19.08■□□□□ 0.65
COL27A1-201ENST00000356083 TACO1Q9BSH4 297 aaKnown RBP19.08■□□□□ 0.65
COL27A1-201ENST00000356083 VPS37BQ9H9H4 285 aa19.08■□□□□ 0.65
COL27A1-201ENST00000356083 WDR7Q9Y4E6 1490 aa19.08■□□□□ 0.65
COL27A1-201ENST00000356083 P4HA1P13674 534 aa19.08■□□□□ 0.65
COL27A1-201ENST00000356083 LMNTD2Q8IXW0 634 aa19.08■□□□□ 0.65
COL27A1-201ENST00000356083 IQUBQ8NA54 791 aa19.08■□□□□ 0.65
COL27A1-201ENST00000356083 RBM28Q9NW13 759 aaKnown RBP19.08■□□□□ 0.65
COL27A1-201ENST00000356083 SKIV2LQ15477 1246 aaKnown RBP19.08■□□□□ 0.64
COL27A1-201ENST00000356083 BRD3Q15059 726 aa19.08■□□□□ 0.64
COL27A1-201ENST00000356083 FAM102BQ5T8I3 360 aa19.08■□□□□ 0.64
COL27A1-201ENST00000356083 TRIM68Q6AZZ1 485 aa19.08■□□□□ 0.64
COL27A1-201ENST00000356083 MICAL1Q8TDZ2 1067 aa19.08■□□□□ 0.64
COL27A1-201ENST00000356083 SUPT6HQ7KZ85 1726 aaKnown RBP19.08■□□□□ 0.64
COL27A1-201ENST00000356083 NESP48681 1621 aa19.08■□□□□ 0.64
COL27A1-201ENST00000356083 CTTNBP2NLQ9P2B4 639 aa19.08■□□□□ 0.64
COL27A1-201ENST00000356083 MCUQ8NE86 351 aa19.08■□□□□ 0.64
COL27A1-201ENST00000356083 C8orf74Q6P047 294 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 MTRQ99707 1265 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 RUFY3Q7L099 469 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 ANGPTL3Q9Y5C1 460 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 AKR1B15C9JRZ8 316 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-201ENST00000356083 OCM2P0CE71 109 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 OCMP0CE72 109 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-201ENST00000356083 ATF7P17544 494 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-201ENST00000356083 BLVRAP53004 296 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 CNNM4Q6P4Q7 775 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 KRBA2Q6ZNG9 492 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 RHPN1Q8TCX5 695 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 RPS6KC1Q96S38 1066 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 POLIQ9UNA4 740 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 BCS1LQ9Y276 419 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
COL27A1-201ENST00000356083 SLC1A4P43007 532 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 TTC6Q86TZ1 520 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 FGD4Q96M96 766 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 PHLDB2Q86SQ0 1253 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 CCDC94Q9BW85 323 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-201ENST00000356083 SESN3P58005 492 aa19.07■□□□□ 0.64
COL27A1-201ENST00000356083 ADAT2Q7Z6V5 191 aaKnown RBP19.07■□□□□ 0.64
COL27A1-201ENST00000356083 B4E1Z4 1266 aa19.06■□□□□ 0.64
COL27A1-201ENST00000356083 RNASELQ05823 741 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms