RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 GALNT17Q6IS24 598 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 CHST3Q7LGC8 479 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 MAPKAPK5Q8IW41 473 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 CEP112Q8N8E3 955 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 GOLGA6AQ9NYA3 693 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 TRPC6Q9Y210 931 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 TBC1D31Q96DN5 1066 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 PCCAP05165 728 aaPredicted RBP12.59□□□□□ -0.39
FN1-204ENST00000356005 ARID5AQ03989 594 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 UBXN1Q04323 297 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 AKNAD1Q5T1N1 836 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 CCDC42Q96M95 316 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 ZNF830Q96NB3 372 aaPredicted RBP12.59□□□□□ -0.39
FN1-204ENST00000356005 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 HOXD10P28358 340 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 NCAPG2Q86XI2 1143 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 TBC1D32Q96NH3 1257 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 RNF17Q9BXT8 1623 aaKnown RBP12.59□□□□□ -0.39
FN1-204ENST00000356005 XPOTO43592 962 aaKnown RBP12.59□□□□□ -0.39
FN1-204ENST00000356005 FLOT1O75955 427 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 C2orf69Q8N8R5 385 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 KIAA0825Q8IV33 1275 aa12.59□□□□□ -0.39
FN1-204ENST00000356005 ZNF277Q9NRM2 450 aaPredicted RBP12.59□□□□□ -0.39
FN1-204ENST00000356005 RPS6KB1P23443 525 aa12.58□□□□□ -0.39
FN1-204ENST00000356005 GOLGA5Q8TBA6 731 aa12.58□□□□□ -0.39
FN1-204ENST00000356005 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.39
FN1-204ENST00000356005 MIS12Q9H081 205 aa12.58□□□□□ -0.39
FN1-204ENST00000356005 PIM2Q9P1W9 311 aa12.58□□□□□ -0.39
FN1-204ENST00000356005 CTAGE9A4FU28 777 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 TRAF5O00463 557 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 POLR2MP0CAP2 368 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 KCTD2Q14681 263 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 ABCB5Q2M3G0 1257 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 SNW1Q13573 536 aaKnown RBP12.58□□□□□ -0.4
FN1-204ENST00000356005 CLUL1Q15846 466 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 CEP63Q96MT8 703 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 EIF4A1P60842 406 aaKnown RBP12.58□□□□□ -0.4
FN1-204ENST00000356005 MYO3BQ8WXR4 1341 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 RIMS1Q86UR5 1692 aaKnown RBP12.58□□□□□ -0.4
FN1-204ENST00000356005 HSF2BPO75031 334 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 SERPINB2P05120 415 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 ODR4Q5SWX8 454 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 CDHR1Q96JP9 859 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 MRPL44Q9H9J2 332 aaKnown RBP12.58□□□□□ -0.4
FN1-204ENST00000356005 RABGAP1Q9Y3P9 1069 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 PTPRTO14522 1441 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 E7EVH7 732 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 CETN3O15182 167 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 TUBB4AP04350 444 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 NCAPH2Q6IBW4 605 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 RPS6KC1Q96S38 1066 aa12.58□□□□□ -0.4
FN1-204ENST00000356005 NONOQ15233 471 aaKnown RBP eCLIP12.57□□□□□ -0.4
FN1-204ENST00000356005 FAM200AQ8TCP9 573 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 FAM107BQ9H098 131 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 TCP10L2B9ZVM9 353 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 GNA14O95837 355 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 DEPTORQ8TB45 409 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 USP17L3A6NCW0 530 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 USP17L4A6NCW7 530 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 ERVV-1B6SEH8 477 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 SH3BP5O60239 455 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 GIGYF1O75420 1035 aaPredicted RBP12.57□□□□□ -0.4
FN1-204ENST00000356005 USP17L1Q7RTZ2 530 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 OVOS2A0A0G2JMS6 1433 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 OVOS2A0A0J9YW53 1432 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 OVOS2Q6IE36 1432 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 TRIM14Q14142 442 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 GCNT3O95395 438 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 TFAP4Q01664 338 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 ERFEQ4G0M1 354 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 EP400NLQ6ZTU2 488 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 MYCT1Q8N699 235 aa12.57□□□□□ -0.4
FN1-204ENST00000356005 CHMLP26374 656 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 SEL1L2Q5TEA6 688 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 CTR9Q6PD62 1173 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 SLC10A4Q96EP9 437 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 ZBTB40Q9NUA8 1239 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 STIM2Q9P246 746 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 TYW5A2RUC4 315 aaKnown RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 TMEM110-MUSTN1A8MSY1 372 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 ADRA2BP18089 450 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 RETREG2Q8NC44 543 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 PRPF31Q8WWY3 499 aaKnown RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 CGNQ9P2M7 1197 aaKnown RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 F13A1P00488 732 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 NT5C2P49902 561 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 DMP1Q13316 513 aaPredicted RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 DSCC1Q9BVC3 393 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 SND1Q7KZF4 910 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■■□□ 17.5
FN1-204ENST00000356005 GPR161Q8N6U8 529 aaKnown RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 TBC1D2Q9BYX2 928 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 DHX36Q9H2U1 1008 aaKnown RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 A2ML1A8K2U0 1454 aa12.56□□□□□ -0.4
FN1-204ENST00000356005 DDX39AO00148 427 aaKnown RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 VIMP08670 466 aaKnown RBP12.56□□□□□ -0.4
FN1-204ENST00000356005 ICA1Q05084 483 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms