RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 EIF3CLB5ME19 914 aaKnown RBP15.42■□□□□ 0.06
TRIM4-203ENST00000355947 RNF40O75150 1001 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 ZPR1O75312 459 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 UBXN1Q04323 297 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 KCTD19Q17RG1 926 aaPredicted RBP15.42■□□□□ 0.06
TRIM4-203ENST00000355947 ARHGEF25Q86VW2 580 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 MAGEB6Q8N7X4 407 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 MLKLQ8NB16 471 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 EIF3CQ99613 913 aaKnown RBP15.42■□□□□ 0.06
TRIM4-203ENST00000355947 ACBD3Q9H3P7 528 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 KRT28Q7Z3Y7 464 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 UTYO14607 1347 aa15.42■□□□□ 0.06
TRIM4-203ENST00000355947 LRRIQ3A6PVS8 624 aaPredicted RBP15.41■□□□□ 0.06
TRIM4-203ENST00000355947 NBPF26B4DH59 902 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 PHKG2P15735 406 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 SF3A3Q12874 501 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRIM4-203ENST00000355947 ENOX2Q16206 610 aaKnown RBP15.41■□□□□ 0.06
TRIM4-203ENST00000355947 BEND6Q5SZJ8 279 aaPredicted RBP15.41■□□□□ 0.06
TRIM4-203ENST00000355947 NBPF14Q5TI25 921 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 NBPF10Q6P3W6 841 aaKnown RBP15.41■□□□□ 0.06
TRIM4-203ENST00000355947 TOM1L2Q6ZVM7 507 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 NBPF15Q8N660 670 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 ANKRD20A12PQ8NF67 263 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 CHP1Q99653 195 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 ZSWIM5Q9P217 1185 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 AKAP2Q9Y2D5 859 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 KIF13AQ9H1H9 1805 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 H0YHG0 523 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 AGXT2Q9BYV1 514 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 EHD4Q9H223 541 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 GNL3LQ9NVN8 582 aaKnown RBP15.41■□□□□ 0.06
TRIM4-203ENST00000355947 SAMM50Q9Y512 469 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 NRXN3Q9Y4C0 1643 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 CD44P16070 742 aaKnown RBP15.41■□□□□ 0.06
TRIM4-203ENST00000355947 MCAMP43121 646 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 CCT5P48643 541 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 EIF5P55010 431 aaKnown RBP15.41■□□□□ 0.06
TRIM4-203ENST00000355947 WTAPQ15007 396 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 CCDC122Q5T0U0 273 aa15.41■□□□□ 0.06
TRIM4-203ENST00000355947 IPO7O95373 1038 aaKnown RBP15.4■□□□□ 0.06
TRIM4-203ENST00000355947 MFSD6Q6ZSS7 791 aa15.4■□□□□ 0.06
TRIM4-203ENST00000355947 TECPR2O15040 1411 aa15.4■□□□□ 0.06
TRIM4-203ENST00000355947 SH2B2O14492 632 aaPredicted RBP15.4■□□□□ 0.06
TRIM4-203ENST00000355947 FOXP2O15409 715 aa15.4■□□□□ 0.06
TRIM4-203ENST00000355947 PPP6R2O75170 966 aa15.4■□□□□ 0.06
TRIM4-203ENST00000355947 IVLP07476 585 aa15.4■□□□□ 0.06
TRIM4-203ENST00000355947 PHKA1P46020 1223 aa15.4■□□□□ 0.06
TRIM4-203ENST00000355947 PIH1D3Q9NQM4 214 aaKnown RBP15.4■□□□□ 0.06
TRIM4-203ENST00000355947 STRN4Q9NRL3 753 aa15.4■□□□□ 0.06
TRIM4-203ENST00000355947 HPSEQ9Y251 543 aa15.4■□□□□ 0.06
TRIM4-203ENST00000355947 MCM7P33993 719 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 AFAP1L1Q8TED9 768 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 SYMPKQ92797 1274 aaKnown RBP15.39■□□□□ 0.05
TRIM4-203ENST00000355947 DEF6Q9H4E7 631 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 MYO6Q9UM54 1294 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 AKAP12Q02952 1782 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 RGPD8O14715 1765 aaPredicted RBP15.39■□□□□ 0.05
TRIM4-203ENST00000355947 ZEB2O60315 1214 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 RABL6Q3YEC7 729 aaPredicted RBP15.39■□□□□ 0.05
TRIM4-203ENST00000355947 FCHSD1Q86WN1 690 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 TRIM75PA6NK02 468 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 SMIM22K7EJ46 135 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 ZNF185O15231 689 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 KCNJ6P48051 423 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 PLCD1P51178 756 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 RNASE9P60153 205 aaKnown RBP15.39■□□□□ 0.05
TRIM4-203ENST00000355947 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 MED15Q96RN5 788 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 MAP3K14Q99558 947 aa15.39■□□□□ 0.05
TRIM4-203ENST00000355947 CYP27B1O15528 508 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 ZFYP08048 801 aaPredicted RBP15.38■□□□□ 0.05
TRIM4-203ENST00000355947 TOB1P50616 345 aaPredicted RBP15.38■□□□□ 0.05
TRIM4-203ENST00000355947 MNAT1P51948 309 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 ENOX1Q8TC92 643 aaKnown RBP15.38■□□□□ 0.05
TRIM4-203ENST00000355947 V9GY48 417 aaPredicted RBP15.38■□□□□ 0.05
TRIM4-203ENST00000355947 ANKARQ7Z5J8 1434 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 PLEKHG1Q9ULL1 1385 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 RNF225M0QZC1 329 aaPredicted RBP15.38■□□□□ 0.05
TRIM4-203ENST00000355947 ATP8B1O43520 1251 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 CXCR5P32302 372 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 PACS2Q86VP3 889 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 KCND1Q9NSA2 647 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 TRIM49BA6NDI0 452 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 MFAP3LO75121 409 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 PPARAQ07869 468 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 ANKRD13CQ8N6S4 541 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 RUFY1Q96T51 708 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 GBP3Q9H0R5 595 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 SLC4A4Q9Y6R1 1079 aa15.38■□□□□ 0.05
TRIM4-203ENST00000355947 ATP1A2P50993 1020 aa15.37■□□□□ 0.05
TRIM4-203ENST00000355947 SLC7A5Q01650 507 aa15.37■□□□□ 0.05
TRIM4-203ENST00000355947 MUM1L1Q5H9M0 696 aa15.37■□□□□ 0.05
TRIM4-203ENST00000355947 KCTD16Q68DU8 428 aa15.37■□□□□ 0.05
TRIM4-203ENST00000355947 SMARCAL1Q9NZC9 954 aa15.37■□□□□ 0.05
TRIM4-203ENST00000355947 LRP2BPQ9P2M1 347 aa15.37■□□□□ 0.05
TRIM4-203ENST00000355947 JRKLQ9Y4A0 524 aa15.37■□□□□ 0.05
TRIM4-203ENST00000355947 PDE6AP16499 860 aa15.37■□□□□ 0.05
TRIM4-203ENST00000355947 C2orf54Q08AI8 447 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms