RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 MAP2K2P36507 400 aa18.37■□□□□ 0.53
C2CD4A-201ENST00000355522 CCDC70Q6NSX1 233 aa18.37■□□□□ 0.53
C2CD4A-201ENST00000355522 SMIM5Q71RC9 77 aa18.37■□□□□ 0.53
C2CD4A-201ENST00000355522 ATG9AQ7Z3C6 839 aa18.37■□□□□ 0.53
C2CD4A-201ENST00000355522 TMEM139Q8IV31 216 aa18.37■□□□□ 0.53
C2CD4A-201ENST00000355522 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
C2CD4A-201ENST00000355522 MYO6Q9UM54 1294 aa18.37■□□□□ 0.53
C2CD4A-201ENST00000355522 PSMB7Q99436 277 aa18.37■□□□□ 0.53
C2CD4A-201ENST00000355522 DSCC1Q9BVC3 393 aa18.37■□□□□ 0.53
C2CD4A-201ENST00000355522 CORO7P57737 925 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 CTDSPL2Q05D32 466 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 MIGA1Q8NAN2 632 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 UBXN6Q9BZV1 441 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 HELLSQ9NRZ9 838 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 TFR2Q9UP52 801 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 BAZ2BQ9UIF8 2168 aaKnown RBP18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 CDKL5O76039 1030 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 EFCAB13Q8IY85 973 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 TRIM10Q9UDY6 481 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 BTBD18B2RXH4 712 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 SMIM22K7EJ46 135 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 INPP5BP32019 993 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 GRIN1Q05586 938 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 EP400NLQ6ZTU2 488 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 EHD4Q9H223 541 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 BRMS1Q9HCU9 246 aa18.36■□□□□ 0.53
C2CD4A-201ENST00000355522 MMS22LQ6ZRQ5 1243 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 EEF2KMTQ96G04 330 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 TUBE1Q9UJT0 475 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 ASAP1Q9ULH1 1129 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 TAB2Q9NYJ8 693 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 CAPN7Q9Y6W3 813 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 KRT9P35527 623 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 DNAJC10Q8IXB1 793 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 MLKLQ8NB16 471 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 GIMAP7Q8NHV1 300 aa18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 NOC3LQ8WTT2 800 aaKnown RBP18.35■□□□□ 0.53
C2CD4A-201ENST00000355522 GGCXP38435 758 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 GNGT1P63211 74 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 FOXO4P98177 505 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 MCTP2Q6DN12 878 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 CCDC24Q8N4L8 307 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 MED4Q9NPJ6 270 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 A0A087WUV0 522 aaPredicted RBP18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 EYA2O00167 538 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 ZBTB43O43298 467 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 BMP6P22004 513 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 USP8P40818 1118 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 ATP1A2P50993 1020 aa18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 CT47A1Q5JQC4 288 aaPredicted RBP18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 TEX13AQ9BXU3 409 aaPredicted RBP18.34■□□□□ 0.53
C2CD4A-201ENST00000355522 NWD1Q149M9 1564 aa18.33■□□□□ 0.53
C2CD4A-201ENST00000355522 GPAA1O43292 621 aa18.33■□□□□ 0.53
C2CD4A-201ENST00000355522 CCDC122Q5T0U0 273 aa18.33■□□□□ 0.53
C2CD4A-201ENST00000355522 GEMIN8Q9NWZ8 242 aaKnown RBP18.33■□□□□ 0.53
C2CD4A-201ENST00000355522 CTNND2Q9UQB3 1225 aa18.33■□□□□ 0.53
C2CD4A-201ENST00000355522 XRN1Q8IZH2 1706 aaKnown RBP18.33■□□□□ 0.53
C2CD4A-201ENST00000355522 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.53
C2CD4A-201ENST00000355522 SSBP05455 408 aaKnown RBP eCLIP18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 NAP1L1P55209 391 aaKnown RBP18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 KCNQ4P56696 695 aa18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 TMEM67Q5HYA8 995 aa18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 SND1Q7KZF4 910 aaKnown RBP eCLIP18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 FAM169AQ9Y6X4 670 aa18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 SYNRGQ9UMZ2 1314 aa18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 MACROD2A1Z1Q3 448 aa18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 GOLGA6BA6NDN3 693 aa18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 ATP2C2O75185 946 aa18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 SSRP1Q08945 709 aaKnown RBP18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 JPH2Q9BR39 696 aaPredicted RBP18.33■□□□□ 0.52
C2CD4A-201ENST00000355522 NDUFAB1O14561 156 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 CNGA4Q8IV77 575 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 BANK1Q8NDB2 785 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 PLBD2Q8NHP8 589 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 FAM212AQ96EL1 285 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 GNL3LQ9NVN8 582 aaKnown RBP18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 TTF2Q9UNY4 1162 aaKnown RBP18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 MINDY4BA8MYZ0 360 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 IFIT3O14879 490 aaKnown RBP18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 HLFQ16534 295 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 KCTD16Q68DU8 428 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 USP49Q70CQ1 688 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 DIS3L2Q8IYB7 885 aaKnown RBP18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 OTUD6BQ8N6M0 293 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 ABCF2Q9UG63 623 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 IFIT5Q13325 482 aaKnown RBP18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 WHAMMP3Q1A5X7 153 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 RRAGBQ5VZM2 374 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 BLZF1Q9H2G9 400 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 SLC12A7Q9Y666 1083 aa18.32■□□□□ 0.52
C2CD4A-201ENST00000355522 FXR1P51114 621 aaKnown RBP eCLIP18.31■□□□□ 0.52
C2CD4A-201ENST00000355522 RESP18Q5W5W9 173 aa18.31■□□□□ 0.52
C2CD4A-201ENST00000355522 CABP5Q9NP86 173 aa18.31■□□□□ 0.52
C2CD4A-201ENST00000355522 WTIPA6NIX2 430 aaPredicted RBP18.31■□□□□ 0.52
C2CD4A-201ENST00000355522 PRKAB2O43741 272 aa18.31■□□□□ 0.52
C2CD4A-201ENST00000355522 PRDM1O75626 825 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms