RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 ZNF444Q8N0Y2 327 aaPredicted RBP26.61■■□□□ 1.85
SCAMP3-202ENST00000355379 FBXO18Q8NFZ0 1043 aa26.61■■□□□ 1.85
SCAMP3-202ENST00000355379 SERPINA10Q9UK55 444 aa26.61■■□□□ 1.85
SCAMP3-202ENST00000355379 WDHD1O75717 1129 aaPredicted RBP26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 TTC6Q86TZ1 520 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 DGKHQ86XP1 1220 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 GDPD2Q9HCC8 539 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 RBM28Q9NW13 759 aaKnown RBP26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 FER1L6Q2WGJ9 1857 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 MYH6P13533 1939 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 YDJCA8MPS7 323 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 CDK8P49336 464 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 R3HDM1Q15032 1099 aaKnown RBP26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 ATL3Q6DD88 541 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 KIAA0825Q8IV33 1275 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 WASF1Q92558 559 aa26.6■■□□□ 1.85
SCAMP3-202ENST00000355379 UPF1Q92900 1129 aaKnown RBP eCLIP26.6■■□□□ 1.852e-8■■■■■ 30.6
SCAMP3-202ENST00000355379 ELP1O95163 1332 aa26.59■■□□□ 1.85
SCAMP3-202ENST00000355379 MYO3BQ8WXR4 1341 aa26.59■■□□□ 1.85
SCAMP3-202ENST00000355379 RASA1P20936 1047 aa26.59■■□□□ 1.85
SCAMP3-202ENST00000355379 SLC4A8Q2Y0W8 1093 aa26.59■■□□□ 1.85
SCAMP3-202ENST00000355379 ALG1Q9BT22 464 aa26.59■■□□□ 1.85
SCAMP3-202ENST00000355379 SCAND2PQ9GZW5 306 aaPredicted RBP26.59■■□□□ 1.85
SCAMP3-202ENST00000355379 MYH8P13535 1937 aa26.59■■□□□ 1.85
SCAMP3-202ENST00000355379 FIBPO43427 364 aa26.58■■□□□ 1.85
SCAMP3-202ENST00000355379 PPFIA3O75145 1194 aa26.58■■□□□ 1.85
SCAMP3-202ENST00000355379 DEKP35659 375 aaKnown RBP26.58■■□□□ 1.85
SCAMP3-202ENST00000355379 UBE2HP62256 183 aa26.58■■□□□ 1.85
SCAMP3-202ENST00000355379 TROAPQ12815 778 aa26.58■■□□□ 1.85
SCAMP3-202ENST00000355379 NUP133Q8WUM0 1156 aa26.58■■□□□ 1.85
SCAMP3-202ENST00000355379 PHKBQ93100 1093 aa26.58■■□□□ 1.85
SCAMP3-202ENST00000355379 SGIP1Q9BQI5 828 aa26.58■■□□□ 1.85
SCAMP3-202ENST00000355379 GZF1Q9H116 711 aaPredicted RBP26.58■■□□□ 1.85
SCAMP3-202ENST00000355379 NPM3O75607 178 aaKnown RBP26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 TSPY3P0CV98 308 aa26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 TSPY8P0CW00 308 aa26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 DALRD3Q5D0E6 543 aaKnown RBP26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 RCSD1Q6JBY9 416 aa26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 NBPF11Q86T75 865 aa26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 TRIM22Q8IYM9 498 aa26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 CRACR2BQ8N4Y2 399 aaPredicted RBP26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 MAP3K14Q99558 947 aa26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 CD2APQ9Y5K6 639 aa26.57■■□□□ 1.84
SCAMP3-202ENST00000355379 FOSBP53539 338 aa26.56■■□□□ 1.84
SCAMP3-202ENST00000355379 FAM173BQ6P4H8 233 aa26.56■■□□□ 1.84
SCAMP3-202ENST00000355379 LARGE2Q8N3Y3 721 aa26.56■■□□□ 1.84
SCAMP3-202ENST00000355379 SLC26A6Q9BXS9 759 aa26.56■■□□□ 1.84
SCAMP3-202ENST00000355379 OSBPL5Q9H0X9 879 aaPredicted RBP26.56■■□□□ 1.84
SCAMP3-202ENST00000355379 DDX4Q9NQI0 724 aaKnown RBP26.56■■□□□ 1.84
SCAMP3-202ENST00000355379 IL17RBQ9NRM6 502 aa26.56■■□□□ 1.84
SCAMP3-202ENST00000355379 CFAP45Q9UL16 551 aa26.56■■□□□ 1.84
SCAMP3-202ENST00000355379 NMT2O60551 498 aa26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 GADD45BO75293 160 aaPredicted RBP26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 GUCY1B3Q02153 619 aa26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 GABPAQ06546 454 aa26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 PICALMQ13492 652 aa26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 ILDR1Q86SU0 546 aaPredicted RBP26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 SLC44A5Q8NCS7 719 aa26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 NEDD1Q8NHV4 660 aa26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 TAOK2Q9UL54 1235 aa26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 RSBN1LQ6PCB5 846 aaPredicted RBP26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 IDI2Q9BXS1 227 aa26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 RNF26Q9BY78 433 aaPredicted RBP26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 SWAP70Q9UH65 585 aa26.55■■□□□ 1.84
SCAMP3-202ENST00000355379 COL4A5P29400 1685 aa26.54■■□□□ 1.84
SCAMP3-202ENST00000355379 DEXIO95424 95 aa26.54■■□□□ 1.84
SCAMP3-202ENST00000355379 VIL1P09327 827 aaKnown RBP26.54■■□□□ 1.84
SCAMP3-202ENST00000355379 BRAPQ7Z569 592 aa26.54■■□□□ 1.84
SCAMP3-202ENST00000355379 ZNF396Q96N95 335 aaPredicted RBP26.54■■□□□ 1.84
SCAMP3-202ENST00000355379 KAT14Q9H8E8 782 aa26.54■■□□□ 1.84
SCAMP3-202ENST00000355379 ZNF277Q9NRM2 450 aaPredicted RBP26.54■■□□□ 1.84
SCAMP3-202ENST00000355379 CAVIN1Q6NZI2 390 aaKnown RBP26.53■■□□□ 1.84
SCAMP3-202ENST00000355379 CTCFLQ8NI51 663 aaPredicted RBP26.53■■□□□ 1.84
SCAMP3-202ENST00000355379 PLIN4Q96Q06 1357 aa26.52■■□□□ 1.84
SCAMP3-202ENST00000355379 TRIM29Q14134 588 aa26.52■■□□□ 1.84
SCAMP3-202ENST00000355379 EHD4Q9H223 541 aa26.52■■□□□ 1.84
SCAMP3-202ENST00000355379 ISY1Q9ULR0 285 aaKnown RBP26.52■■□□□ 1.84
SCAMP3-202ENST00000355379 NOVP48745 357 aa26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 RBM5P52756 815 aaKnown RBP eCLIP26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 FUT2Q10981 343 aa26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 KRT40Q6A162 431 aa26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 OTUD7BQ6GQQ9 843 aa26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 NIM1KQ8IY84 436 aa26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 LEO1Q8WVC0 666 aaPredicted RBP26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 SPATA32Q96LK8 384 aa26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 GMLQ99445 158 aa26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 TFIP11Q9UBB9 837 aaKnown RBP26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 ZNRF3Q9ULT6 936 aa26.51■■□□□ 1.83
SCAMP3-202ENST00000355379 PRPF3O43395 683 aaKnown RBP26.5■■□□□ 1.83
SCAMP3-202ENST00000355379 HLA-DOAP06340 250 aa26.5■■□□□ 1.83
SCAMP3-202ENST00000355379 KIF23Q02241 960 aaPredicted RBP26.5■■□□□ 1.83
SCAMP3-202ENST00000355379 TMTC3Q6ZXV5 915 aa26.5■■□□□ 1.83
SCAMP3-202ENST00000355379 SYAP1Q96A49 352 aaPredicted RBP26.5■■□□□ 1.83
SCAMP3-202ENST00000355379 AIFM3Q96NN9 605 aa26.5■■□□□ 1.83
SCAMP3-202ENST00000355379 DHX36Q9H2U1 1008 aaKnown RBP26.5■■□□□ 1.83
SCAMP3-202ENST00000355379 KIF5BP33176 963 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 PNMA1Q8ND90 353 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 SERPINB13Q9UIV8 391 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 SIPA1L1O43166 1804 aa26.49■■□□□ 1.83
SCAMP3-202ENST00000355379 COL2A1P02458 1487 aaPredicted RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms