RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PRPF3O43395 683 aaKnown RBP20.03■□□□□ 0.8
VPS13B-201ENST00000355155 DEXIO95424 95 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 FERMT3Q86UX7 667 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 FAM177A1Q8N128 213 aaPredicted RBP20.03■□□□□ 0.8
VPS13B-201ENST00000355155 ALG1Q9BT22 464 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 GDPD2Q9HCC8 539 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 WDHD1O75717 1129 aaPredicted RBP20.03■□□□□ 0.8
VPS13B-201ENST00000355155 RASA1P20936 1047 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 MRE11P49959 708 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 CCDC93Q567U6 631 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 APOBEC3HQ6NTF7 200 aaKnown RBP20.03■□□□□ 0.8
VPS13B-201ENST00000355155 ZKSCAN3Q9BRR0 538 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 PDGFDQ9GZP0 370 aaPredicted RBP20.03■□□□□ 0.8
VPS13B-201ENST00000355155 SERPINA10Q9UK55 444 aa20.03■□□□□ 0.8
VPS13B-201ENST00000355155 USP17L3A6NCW0 530 aa20.02■□□□□ 0.8
VPS13B-201ENST00000355155 USP17L4A6NCW7 530 aa20.02■□□□□ 0.8
VPS13B-201ENST00000355155 NASPP49321 788 aaPredicted RBP20.02■□□□□ 0.8
VPS13B-201ENST00000355155 DOK7Q18PE1 504 aa20.02■□□□□ 0.8
VPS13B-201ENST00000355155 USP17L1Q7RTZ2 530 aa20.02■□□□□ 0.8
VPS13B-201ENST00000355155 EHD4Q9H223 541 aa20.02■□□□□ 0.8
VPS13B-201ENST00000355155 IL17RBQ9NRM6 502 aa20.02■□□□□ 0.8
VPS13B-201ENST00000355155 TOMM22Q9NS69 142 aa20.02■□□□□ 0.8
VPS13B-201ENST00000355155 TTF2Q9UNY4 1162 aaKnown RBP20.02■□□□□ 0.8
VPS13B-201ENST00000355155 FIBPO43427 364 aa20.02■□□□□ 0.79
VPS13B-201ENST00000355155 NEDD1Q8NHV4 660 aa20.02■□□□□ 0.79
VPS13B-201ENST00000355155 TEKT1Q969V4 418 aa20.02■□□□□ 0.79
VPS13B-201ENST00000355155 POLR3EQ9NVU0 708 aa20.02■□□□□ 0.79
VPS13B-201ENST00000355155 PLCD1P51178 756 aa20.01■□□□□ 0.79
VPS13B-201ENST00000355155 CCDC183Q5T5S1 534 aa20.01■□□□□ 0.79
VPS13B-201ENST00000355155 TMTC3Q6ZXV5 915 aa20.01■□□□□ 0.79
VPS13B-201ENST00000355155 IDI2Q9BXS1 227 aa20.01■□□□□ 0.79
VPS13B-201ENST00000355155 YEATS4O95619 227 aa20.01■□□□□ 0.79
VPS13B-201ENST00000355155 LRSAM1Q6UWE0 723 aa20.01■□□□□ 0.79
VPS13B-201ENST00000355155 SPATA32Q96LK8 384 aa20.01■□□□□ 0.79
VPS13B-201ENST00000355155 GZF1Q9H116 711 aaPredicted RBP20.01■□□□□ 0.79
VPS13B-201ENST00000355155 GAS2L3Q86XJ1 694 aa20■□□□□ 0.79
VPS13B-201ENST00000355155 MAPKAPK5Q8IW41 473 aa20■□□□□ 0.79
VPS13B-201ENST00000355155 TRIM22Q8IYM9 498 aa20■□□□□ 0.79
VPS13B-201ENST00000355155 MYL10Q9BUA6 226 aa20■□□□□ 0.79
VPS13B-201ENST00000355155 SWAP70Q9UH65 585 aa20■□□□□ 0.79
VPS13B-201ENST00000355155 CDK8P49336 464 aa20■□□□□ 0.79
VPS13B-201ENST00000355155 KRT40Q6A162 431 aa20■□□□□ 0.79
VPS13B-201ENST00000355155 IGKV6D-41A0A0C4DH26 115 aa19.99■□□□□ 0.79
VPS13B-201ENST00000355155 CRKP46108 304 aa19.99■□□□□ 0.79
VPS13B-201ENST00000355155 COL4A5P29400 1685 aa19.99■□□□□ 0.79
VPS13B-201ENST00000355155 TSPY2A6NKD2 308 aa19.99■□□□□ 0.79
VPS13B-201ENST00000355155 PRDM1O75626 825 aa19.99■□□□□ 0.79
VPS13B-201ENST00000355155 POLR3DP05423 398 aaPredicted RBP19.99■□□□□ 0.79
VPS13B-201ENST00000355155 TFAP4Q01664 338 aa19.99■□□□□ 0.79
VPS13B-201ENST00000355155 FAM173BQ6P4H8 233 aa19.99■□□□□ 0.79
VPS13B-201ENST00000355155 RBM27Q9P2N5 1060 aaKnown RBP19.99■□□□□ 0.79
VPS13B-201ENST00000355155 RXRAP19793 462 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 SMARCA1P28370 1054 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 GRM4Q14833 912 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 MYSM1Q5VVJ2 828 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 CDC42EP5Q6NZY7 148 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 METTL16Q86W50 562 aaKnown RBP19.98■□□□□ 0.79
VPS13B-201ENST00000355155 RAB11FIP4Q86YS3 637 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 PHKBQ93100 1093 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 MTFR1LQ9H019 292 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 CNTNAP5Q8WYK1 1306 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 ARFGEF1Q9Y6D6 1849 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 PKN1Q16512 942 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 RBM43Q6ZSC3 357 aaKnown RBP19.98■□□□□ 0.79
VPS13B-201ENST00000355155 DYNLL2Q96FJ2 89 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 PGBD1Q96JS3 809 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 OSBPL5Q9H0X9 879 aaPredicted RBP19.98■□□□□ 0.79
VPS13B-201ENST00000355155 FOXP1Q9H334 677 aaPredicted RBP19.98■□□□□ 0.79
VPS13B-201ENST00000355155 MMP1P03956 469 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 MMP14P50281 582 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 SLC26A6Q9BXS9 759 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 DBNDD1Q9H9R9 158 aa19.98■□□□□ 0.79
VPS13B-201ENST00000355155 KIF28PB7ZC32 967 aa19.97■□□□□ 0.79
VPS13B-201ENST00000355155 DPEP1P16444 411 aa19.97■□□□□ 0.79
VPS13B-201ENST00000355155 USP28Q96RU2 1077 aa19.97■□□□□ 0.79
VPS13B-201ENST00000355155 SGIP1Q9BQI5 828 aa19.97■□□□□ 0.79
VPS13B-201ENST00000355155 GRPEL1Q9HAV7 217 aa19.97■□□□□ 0.79
VPS13B-201ENST00000355155 ATRNL1Q5VV63 1379 aa19.97■□□□□ 0.79
VPS13B-201ENST00000355155 G3V3G9 751 aa19.97■□□□□ 0.79
VPS13B-201ENST00000355155 FOXD4L6Q3SYB3 417 aaPredicted RBP19.97■□□□□ 0.79
VPS13B-201ENST00000355155 FAM47AQ5JRC9 791 aa19.97■□□□□ 0.79
VPS13B-201ENST00000355155 DCAF8Q5TAQ9 597 aa19.97■□□□□ 0.79
VPS13B-201ENST00000355155 FOXD4L3Q6VB84 417 aaPredicted RBP19.97■□□□□ 0.79
VPS13B-201ENST00000355155 ZNF444Q8N0Y2 327 aaPredicted RBP19.97■□□□□ 0.79
VPS13B-201ENST00000355155 DDX4Q9NQI0 724 aaKnown RBP19.97■□□□□ 0.79
VPS13B-201ENST00000355155 A0A1W2PQ27 194 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 A0A1W2PQ64 194 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 A0A1W2PQD8 194 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 YDJCA8MPS7 323 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 GMLQ99445 158 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.96■□□□□ 0.79
VPS13B-201ENST00000355155 MKNK2Q9HBH9 465 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 KIF5BP33176 963 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 GNAQP50148 359 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 AOC3Q16853 763 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 LINC00301Q8NCQ3 95 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 LZTS2Q9BRK4 669 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 USP40Q9NVE5 1235 aa19.96■□□□□ 0.79
VPS13B-201ENST00000355155 VIL1P09327 827 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms