RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 CDC5LQ99459 802 aaKnown RBP8.88□□□□□ -0.99
HTT-201ENST00000355072 DKC1O60832 514 aaKnown RBP eCLIP8.87□□□□□ -0.99
HTT-201ENST00000355072 CRNKL1Q9BZJ0 848 aaKnown RBP8.87□□□□□ -0.99
HTT-201ENST00000355072 ARHGEF9O43307 516 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 ICE2Q659A1 982 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 WWC3Q9ULE0 1092 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 DTNBO60941 627 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 HLA-DOAP06340 250 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 KRT39Q6A163 491 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 NLRP7Q8WX94 980 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 CUEDC2Q9H467 287 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 FAM169AQ9Y6X4 670 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 KRT2P35908 639 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 IL9RQ01113 521 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 PAK1Q13153 545 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 GALNT17Q6IS24 598 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 TEX2Q8IWB9 1127 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 FAM210AQ96ND0 272 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 CFAP73A6NFT4 308 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 VIPAS39Q9H9C1 493 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 RRP15Q9Y3B9 282 aaKnown RBP8.87□□□□□ -0.99
HTT-201ENST00000355072 HSPA1LP34931 641 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 RGS22Q8NE09 1264 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 TRIM60Q495X7 471 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 TCOF1Q13428 1488 aaKnown RBP8.87□□□□□ -0.99
HTT-201ENST00000355072 DEXIO95424 95 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 TATP17735 454 aaPredicted RBP8.87□□□□□ -0.99
HTT-201ENST00000355072 BCAR3O75815 825 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 ATF3P18847 181 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 PASKQ96RG2 1323 aa8.87□□□□□ -0.99
HTT-201ENST00000355072 KLHDC4Q8TBB5 520 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 SYTL4Q96C24 671 aaPredicted RBP8.86□□□□□ -0.99
HTT-201ENST00000355072 MTRQ99707 1265 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 ZNF277Q9NRM2 450 aaPredicted RBP8.86□□□□□ -0.99
HTT-201ENST00000355072 STOML1Q9UBI4 398 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 C4BPBP20851 252 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 GTF3C6Q969F1 213 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 ZHX3Q9H4I2 956 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 GEMIN8Q9NWZ8 242 aaKnown RBP8.86□□□□□ -0.99
HTT-201ENST00000355072 MSH5O43196 834 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 BLVRAP53004 296 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 RRAGBQ5VZM2 374 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 MAP7D3Q8IWC1 876 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 CDAN1Q8IWY9 1227 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 FAM8A1Q9UBU6 413 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 GOLGA8IPA6NC78 632 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 DACT1Q9NYF0 836 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 AOPEPQ8N6M6 819 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 CLSTN2Q9H4D0 955 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 CHUKO15111 745 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 CALUO43852 315 aaPredicted RBP8.86□□□□□ -0.99
HTT-201ENST00000355072 GSTA2P09210 222 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 TSC22D3Q99576 134 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 H0YCG3 227 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 OAS2P29728 719 aaKnown RBP8.86□□□□□ -0.99
HTT-201ENST00000355072 HSPA13P48723 471 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 PRIM1P49642 420 aaKnown RBP8.86□□□□□ -0.99
HTT-201ENST00000355072 RASIP1Q5U651 963 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 DHX9Q08211 1270 aaKnown RBP8.86□□□□□ -0.99
HTT-201ENST00000355072 SH2D4AQ9H788 454 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 TDRD9Q8NDG6 1382 aaKnown RBP8.86□□□□□ -0.99
HTT-201ENST00000355072 SSFA2P28290 1259 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 MCM10Q7L590 875 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 SAAL1Q96ER3 474 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 ESYT1Q9BSJ8 1104 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 IPO11Q9UI26 975 aaKnown RBP8.86□□□□□ -0.99
HTT-201ENST00000355072 IKBKBO14920 756 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 PYGBP11216 843 aa8.86□□□□□ -0.99
HTT-201ENST00000355072 HDAC4P56524 1084 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 CTAGE3PQ8IX95 158 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 CACTINQ8WUQ7 758 aaKnown RBP8.85□□□□□ -0.99
HTT-201ENST00000355072 IFIT1BQ5T764 474 aaKnown RBP8.85□□□□□ -0.99
HTT-201ENST00000355072 EXOC7Q9UPT5 735 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 SBNO2Q9Y2G9 1366 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 EIF2S1P05198 315 aaKnown RBP8.85□□□□□ -0.99
HTT-201ENST00000355072 HOXB7P09629 217 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 PDE6CP51160 858 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 C8orf34Q49A92 452 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 CCDC125Q86Z20 511 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 SERPINB4P48594 390 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 TCERG1LQ5VWI1 586 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 BCAS4Q8TDM0 211 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 ZKSCAN3Q9BRR0 538 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 MID2Q9UJV3 735 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 MCMDC2Q4G0Z9 681 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 CCDC197Q8NCU1 140 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 OPTNQ96CV9 577 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 TTC25Q96NG3 672 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 ZNF569Q5MCW4 686 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 JPH4Q96JJ6 628 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.85□□□□□ -0.99
HTT-201ENST00000355072 RBM6P78332 1123 aaKnown RBP8.85□□□□□ -0.99
HTT-201ENST00000355072 TAF11Q15544 211 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 ARMC2Q8NEN0 867 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 ARHGAP26Q9UNA1 814 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 RSPH10B2B2RC85 870 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 RSPH10BP0C881 870 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 NEK2P51955 445 aa8.85□□□□□ -0.99
HTT-201ENST00000355072 GSDMBQ8TAX9 411 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms