RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 VPS37DQ86XT2 251 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 RAB11FIP4Q86YS3 637 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 RRP36Q96EU6 259 aaKnown RBP8.86□□□□□ -0.99
CD46-203ENST00000354848 RPGRIP1Q96KN7 1286 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 PAGR1Q9BTK6 254 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 CENPHQ9H3R5 247 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 ACEP12821 1306 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 C4AP0C0L4 1744 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 C4BP0C0L5 1744 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 A6NNZ2 444 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 GRM8O00222 908 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 RTN2O75298 545 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 A1BGP04217 495 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 HOXB7P09629 217 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 PLCD1P51178 756 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 NAP1L1P55209 391 aaKnown RBP8.86□□□□□ -0.99
CD46-203ENST00000354848 TUBB8Q3ZCM7 444 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 TTMPQ5BVD1 217 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 MICALCLQ6ZW33 695 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 CCDC13Q8IYE1 715 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 FBXL16Q8N461 479 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 ARL8AQ96BM9 186 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 HPS5Q9UPZ3 1129 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 KDM3BQ7LBC6 1761 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 OPA1O60313 960 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 INHBEP58166 350 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 IRX1P78414 480 aaPredicted RBP8.86□□□□□ -0.99
CD46-203ENST00000354848 PLCB4Q15147 1175 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 TTC39AQ5SRH9 613 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 NAA35Q5VZE5 725 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 SND1Q7KZF4 910 aaKnown RBP eCLIP8.86□□□□□ -0.999e-12■■■■□ 20.8
CD46-203ENST00000354848 CEP57Q86XR8 500 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 AIFM3Q96NN9 605 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 HINFPQ9BQA5 517 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 SLC40A1Q9NP59 571 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.86□□□□□ -0.99
CD46-203ENST00000354848 ABHD10Q9NUJ1 306 aa8.86□□□□□ -0.99
CD46-203ENST00000354848 RBM28Q9NW13 759 aaKnown RBP8.86□□□□□ -0.99
CD46-203ENST00000354848 ANKARQ7Z5J8 1434 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 KLF18A0A0U1RQI7 1052 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 GOLGA8BA8MQT2 603 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 CPLX1O14810 134 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 HSPD1P10809 573 aaKnown RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 EPB41P11171 864 aaKnown RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 SF3B2Q13435 895 aaKnown RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 RNF187Q5TA31 235 aaPredicted RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 PAPD7Q5XG87 772 aaKnown RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 CYP26C1Q6V0L0 522 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 GRAMD1CQ8IYS0 662 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 SETD1BQ9UPS6 1966 aaKnown RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 RNF225M0QZC1 329 aaPredicted RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 KCNQ3O43525 872 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 ZEB2O60315 1214 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 ERCC5P28715 1186 aaPredicted RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 CLNS1AP54105 237 aaKnown RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 SARNPP82979 210 aaKnown RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 CKAP4Q07065 602 aaKnown RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 TNNI3KQ59H18 835 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 KSR2Q6VAB6 950 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 TRIML1Q8N9V2 468 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 KBTBD3Q8NAB2 608 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 HAUS7Q99871 368 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 SERTAD1Q9UHV2 236 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 REXO2Q9Y3B8 237 aaKnown RBP8.85□□□□□ -0.99
CD46-203ENST00000354848 FPGT-TNNI3KV9GXZ4 949 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 OVOS2A0A0G2JMS6 1433 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 UTYO14607 1347 aa8.85□□□□□ -0.99
CD46-203ENST00000354848 ECM29Q5VYK3 1845 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 POLR2DO15514 142 aaKnown RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 PDHBP11177 359 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 CDC25AP30304 524 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 CDR1P51861 262 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 TBC1D8BQ0IIM8 1120 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 SNCBQ16143 134 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 GRIPAP1Q4V328 841 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 SPATA1Q5VX52 437 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 FAM228AQ86W67 206 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 CTAGE1Q96RT6 745 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 EPN3Q9H201 632 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 SEC31BQ9NQW1 1179 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 USP6P35125 1406 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 DDX60Q8IY21 1712 aaKnown RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 ITIH6Q6UXX5 1313 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 A0A1B0GUA9 196 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 FRMD3A2A2Y4 597 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 PDE2AO00408 941 aaPredicted RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 IRF6O14896 467 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 LSP1P33241 339 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 STX17P56962 302 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 FILIP1LQ4L180 1135 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 UBE3BQ7Z3V4 1068 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 ZNF473Q8WTR7 871 aaKnown RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 JAKMIP2Q96AA8 810 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 DBF4Q9UBU7 674 aaPredicted RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 TAOK2Q9UL54 1235 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.84□□□□□ -0.99
CD46-203ENST00000354848 PALLDQ8WX93 1383 aa8.84□□□□□ -0.99
CD46-203ENST00000354848 MYO5AQ9Y4I1 1855 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms