RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 VSTM4Q8IW00 320 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 CCDC24Q8N4L8 307 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 ESR2Q92731 530 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 EPSTI1Q96J88 318 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 PNPLA7Q6ZV29 1317 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 PLEKHA8P1O95397 391 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 NOM1Q5C9Z4 860 aaKnown RBP22.4■■□□□ 1.18
COL13A1-201ENST00000354547 SHISA4Q96DD7 197 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 ERO1AQ96HE7 468 aa22.4■■□□□ 1.18
COL13A1-201ENST00000354547 SAMSN1Q9NSI8 373 aaKnown RBP22.4■■□□□ 1.18
COL13A1-201ENST00000354547 FBXO38Q6PIJ6 1188 aa22.39■■□□□ 1.18
COL13A1-201ENST00000354547 STAMQ92783 540 aa22.39■■□□□ 1.18
COL13A1-201ENST00000354547 PSDA5PKW4 1024 aaPredicted RBP22.39■■□□□ 1.17
COL13A1-201ENST00000354547 GTF2E1P29083 439 aaPredicted RBP22.39■■□□□ 1.17
COL13A1-201ENST00000354547 STX17P56962 302 aa22.39■■□□□ 1.17
COL13A1-201ENST00000354547 TMTC2Q8N394 836 aa22.39■■□□□ 1.17
COL13A1-201ENST00000354547 KIF2AO00139 706 aaPredicted RBP22.39■■□□□ 1.17
COL13A1-201ENST00000354547 ERFEQ4G0M1 354 aa22.39■■□□□ 1.17
COL13A1-201ENST00000354547 ENAHQ8N8S7 591 aaPredicted RBP22.39■■□□□ 1.17
COL13A1-201ENST00000354547 AK7Q96M32 723 aa22.39■■□□□ 1.17
COL13A1-201ENST00000354547 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
COL13A1-201ENST00000354547 COBLO75128 1261 aa22.38■■□□□ 1.17
COL13A1-201ENST00000354547 IFIT1BQ5T764 474 aaKnown RBP22.38■■□□□ 1.17
COL13A1-201ENST00000354547 ECM29Q5VYK3 1845 aa22.38■■□□□ 1.17
COL13A1-201ENST00000354547 DISP2A7MBM2 1401 aa22.38■■□□□ 1.17
COL13A1-201ENST00000354547 WNT7AO00755 349 aa22.38■■□□□ 1.17
COL13A1-201ENST00000354547 KCNQ2O43526 872 aa22.38■■□□□ 1.17
COL13A1-201ENST00000354547 PARP10Q53GL7 1025 aa22.38■■□□□ 1.17
COL13A1-201ENST00000354547 NMT2O60551 498 aa22.37■■□□□ 1.17
COL13A1-201ENST00000354547 ZNF174Q15697 407 aa22.37■■□□□ 1.17
COL13A1-201ENST00000354547 PRDM4Q9UKN5 801 aa22.37■■□□□ 1.17
COL13A1-201ENST00000354547 URI1O94763 535 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-201ENST00000354547 ANKRD18AQ8IVF6 992 aa22.37■■□□□ 1.17
COL13A1-201ENST00000354547 SMYD4Q8IYR2 804 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-201ENST00000354547 OGFRQ9NZT2 677 aa22.37■■□□□ 1.17
COL13A1-201ENST00000354547 ZSCAN10Q96SZ4 725 aaPredicted RBP22.36■■□□□ 1.17
COL13A1-201ENST00000354547 FEZ1Q99689 392 aa22.36■■□□□ 1.17
COL13A1-201ENST00000354547 SRPRBQ9Y5M8 271 aaKnown RBP22.36■■□□□ 1.17
COL13A1-201ENST00000354547 CHD4Q14839 1912 aa22.36■■□□□ 1.17
COL13A1-201ENST00000354547 A0A087X0B3 334 aa22.36■■□□□ 1.17
COL13A1-201ENST00000354547 SEC23AQ15436 765 aa22.36■■□□□ 1.17
COL13A1-201ENST00000354547 ZNF397Q8NF99 534 aaPredicted RBP22.36■■□□□ 1.17
COL13A1-201ENST00000354547 CDC5LQ99459 802 aaKnown RBP22.36■■□□□ 1.17
COL13A1-201ENST00000354547 KCND1Q9NSA2 647 aa22.36■■□□□ 1.17
COL13A1-201ENST00000354547 GNL3LQ9NVN8 582 aaKnown RBP22.36■■□□□ 1.17
COL13A1-201ENST00000354547 TRIM75PA6NK02 468 aa22.36■■□□□ 1.17
COL13A1-201ENST00000354547 ETF1P62495 437 aaKnown RBP22.36■■□□□ 1.17
COL13A1-201ENST00000354547 FAM47AQ5JRC9 791 aa22.36■■□□□ 1.17
COL13A1-201ENST00000354547 CATIPQ7Z7H3 387 aa22.36■■□□□ 1.17
COL13A1-201ENST00000354547 MARCH10Q8NA82 808 aaPredicted RBP22.36■■□□□ 1.17
COL13A1-201ENST00000354547 USP17L12C9JPN9 530 aa22.35■■□□□ 1.17
COL13A1-201ENST00000354547 USP17L21D6R901 530 aa22.35■■□□□ 1.17
COL13A1-201ENST00000354547 KLRK1P26718 216 aa22.35■■□□□ 1.17
COL13A1-201ENST00000354547 CPLX3Q8WVH0 158 aa22.35■■□□□ 1.17
COL13A1-201ENST00000354547 NUTM2BA6NNL0 878 aaPredicted RBP22.35■■□□□ 1.17
COL13A1-201ENST00000354547 NUTM2EB1AL46 878 aaPredicted RBP22.35■■□□□ 1.17
COL13A1-201ENST00000354547 NUTM2AQ8IVF1 878 aaPredicted RBP22.35■■□□□ 1.17
COL13A1-201ENST00000354547 RGS22Q8NE09 1264 aa22.35■■□□□ 1.17
COL13A1-201ENST00000354547 MED15Q96RN5 788 aa22.35■■□□□ 1.17
COL13A1-201ENST00000354547 CEP131Q9UPN4 1083 aa22.35■■□□□ 1.17
COL13A1-201ENST00000354547 ACTN4O43707 911 aaKnown RBP22.34■■□□□ 1.17
COL13A1-201ENST00000354547 PKN1Q16512 942 aa22.34■■□□□ 1.17
COL13A1-201ENST00000354547 CAVIN4Q5BKX8 364 aa22.34■■□□□ 1.17
COL13A1-201ENST00000354547 CREBRFQ8IUR6 639 aa22.34■■□□□ 1.17
COL13A1-201ENST00000354547 TFCP2L1Q9NZI6 479 aa22.34■■□□□ 1.17
COL13A1-201ENST00000354547 XBP1P17861 261 aa22.34■■□□□ 1.17
COL13A1-201ENST00000354547 DMTNQ08495 405 aa22.34■■□□□ 1.17
COL13A1-201ENST00000354547 RIOK1Q9BRS2 568 aaKnown RBP22.34■■□□□ 1.17
COL13A1-201ENST00000354547 DESI2Q9BSY9 194 aa22.34■■□□□ 1.17
COL13A1-201ENST00000354547 DDX41Q9UJV9 622 aaKnown RBP22.34■■□□□ 1.17
COL13A1-201ENST00000354547 KRT2P35908 639 aa22.33■■□□□ 1.17
COL13A1-201ENST00000354547 MORC3Q14149 939 aa22.33■■□□□ 1.17
COL13A1-201ENST00000354547 CELF1Q92879 486 aaKnown RBP22.33■■□□□ 1.17
COL13A1-201ENST00000354547 BAG1Q99933 345 aaPredicted RBP22.33■■□□□ 1.17
COL13A1-201ENST00000354547 AATFQ9NY61 560 aaKnown RBP eCLIP22.33■■□□□ 1.17
COL13A1-201ENST00000354547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.33■■□□□ 1.17
COL13A1-201ENST00000354547 COL4A1P02462 1669 aa22.33■■□□□ 1.17
COL13A1-201ENST00000354547 MLKLQ8NB16 471 aa22.33■■□□□ 1.17
COL13A1-201ENST00000354547 SYMPKQ92797 1274 aaKnown RBP22.33■■□□□ 1.17
COL13A1-201ENST00000354547 VWA3AA6NCI4 1184 aa22.33■■□□□ 1.16
COL13A1-201ENST00000354547 FANCGO15287 622 aa22.33■■□□□ 1.16
COL13A1-201ENST00000354547 IQCA1Q86XH1 822 aa22.33■■□□□ 1.16
COL13A1-201ENST00000354547 REXO1L1PQ8IX06 675 aa22.33■■□□□ 1.16
COL13A1-201ENST00000354547 RNF26Q9BY78 433 aaPredicted RBP22.33■■□□□ 1.16
COL13A1-201ENST00000354547 MTMR7Q9Y216 660 aa22.33■■□□□ 1.16
COL13A1-201ENST00000354547 MYH2Q9UKX2 1941 aa22.32■■□□□ 1.16
COL13A1-201ENST00000354547 ZNF384Q8TF68 577 aa22.32■■□□□ 1.16
COL13A1-201ENST00000354547 PPP2R2CQ9Y2T4 447 aa22.32■■□□□ 1.16
COL13A1-201ENST00000354547 TAF1P21675 1872 aa22.32■■□□□ 1.16
COL13A1-201ENST00000354547 TOGARAM2Q6ZUX3 1019 aa22.32■■□□□ 1.16
COL13A1-201ENST00000354547 VEGFAP15692 232 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-201ENST00000354547 SARSP49591 514 aaKnown RBP22.31■■□□□ 1.16
COL13A1-201ENST00000354547 ARHGAP29Q52LW3 1261 aa22.31■■□□□ 1.16
COL13A1-201ENST00000354547 TRIM65Q6PJ69 517 aa22.31■■□□□ 1.16
COL13A1-201ENST00000354547 FAM84BQ96KN1 310 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-201ENST00000354547 L2HGDHQ9H9P8 463 aa22.31■■□□□ 1.16
COL13A1-201ENST00000354547 MINPP1Q9UNW1 487 aa22.31■■□□□ 1.16
COL13A1-201ENST00000354547 RTL9Q8NET4 1388 aa22.31■■□□□ 1.16
COL13A1-201ENST00000354547 TEX33O43247 280 aa22.31■■□□□ 1.16
COL13A1-201ENST00000354547 CYP2D6P10635 497 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms