RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 CTDSPL2Q05D32 466 aa14.95□□□□□ -0.02
LMBR1-201ENST00000353442 HP1BP3Q5SSJ5 553 aaPredicted RBP14.95□□□□□ -0.02
LMBR1-201ENST00000353442 SUPT20HQ8NEM7 779 aa14.95□□□□□ -0.02
LMBR1-201ENST00000353442 MGARPQ8TDB4 240 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 TTC21BQ7Z4L5 1316 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 GTF2IP78347 998 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 RBM28Q9NW13 759 aaKnown RBP14.94□□□□□ -0.02
LMBR1-201ENST00000353442 DACT1Q9NYF0 836 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 CALCOCO1Q9P1Z2 691 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
LMBR1-201ENST00000353442 MCUQ8NE86 351 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 PPP1R12CQ9BZL4 782 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 PARP2Q9UGN5 583 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 CTAGE3PQ8IX95 158 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 RBM46Q8TBY0 533 aaKnown RBP14.94□□□□□ -0.02
LMBR1-201ENST00000353442 SMYD2Q9NRG4 433 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 TNNC1P63316 161 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 OTUD7BQ6GQQ9 843 aa14.94□□□□□ -0.02
LMBR1-201ENST00000353442 ZNF594Q96JF6 807 aaPredicted RBP14.94□□□□□ -0.02
LMBR1-201ENST00000353442 DKC1O60832 514 aaKnown RBP eCLIP14.94□□□□□ -0.02
LMBR1-201ENST00000353442 CDC26Q8NHZ8 85 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 USP40Q9NVE5 1235 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 C1orf228Q6PIY5 440 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 VPS37BQ9H9H4 285 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 RABGAP1Q9Y3P9 1069 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 P4HA1P13674 534 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 CCDC26Q8TAB7 109 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 RMDN2Q96LZ7 410 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 AS3MTQ9HBK9 375 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 HAUS3Q68CZ6 603 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 ARFGAP3Q9NP61 516 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 CCDC171Q6TFL3 1326 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 HFM1A2PYH4 1435 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 PDE6BP35913 854 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 IDI1Q13907 227 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 TMX3Q96JJ7 454 aa14.93□□□□□ -0.02
LMBR1-201ENST00000353442 BICC1Q9H694 974 aaKnown RBP14.93□□□□□ -0.02
LMBR1-201ENST00000353442 LUC7L2Q9Y383 392 aaKnown RBP14.93□□□□□ -0.02
LMBR1-201ENST00000353442 HHATQ5VTY9 493 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 CCDC186Q7Z3E2 898 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 PPFIBP2Q8ND30 876 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 HDAC11Q96DB2 347 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
LMBR1-201ENST00000353442 THRAP3Q9Y2W1 955 aaKnown RBP14.92□□□□□ -0.02
LMBR1-201ENST00000353442 INPP1P49441 399 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 UTP11Q9Y3A2 253 aaKnown RBP14.92□□□□□ -0.02
LMBR1-201ENST00000353442 CYP2J2P51589 502 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 FAM47AQ5JRC9 791 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 WDR48Q8TAF3 677 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 GDAP1Q8TB36 358 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 SNX29Q8TEQ0 813 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 FTOQ9C0B1 505 aaKnown RBP eCLIP14.92□□□□□ -0.02
LMBR1-201ENST00000353442 V9GY48 417 aaPredicted RBP14.92□□□□□ -0.02
LMBR1-201ENST00000353442 JADE1Q6IE81 842 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 N4BP2L2Q92802 583 aaPredicted RBP14.92□□□□□ -0.02
LMBR1-201ENST00000353442 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 AKT3Q9Y243 479 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
LMBR1-201ENST00000353442 PRR16Q569H4 304 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 AKAP4Q5JQC9 854 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 RSAD2Q8WXG1 361 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 IFNKQ9P0W0 207 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 KLHL7Q8IXQ5 586 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 CCDC68Q9H2F9 335 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 DNM3Q9UQ16 869 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 ANGPTL3Q9Y5C1 460 aa14.92□□□□□ -0.02
LMBR1-201ENST00000353442 PRIM1P49642 420 aaKnown RBP14.91□□□□□ -0.02
LMBR1-201ENST00000353442 ARHGEF6Q15052 776 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 PRPF38AQ8NAV1 312 aaKnown RBP14.91□□□□□ -0.02
LMBR1-201ENST00000353442 MYL10Q9BUA6 226 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 UBN2Q6ZU65 1347 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 MYSM1Q5VVJ2 828 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 UBL4BQ8N7F7 174 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 NUB1Q9Y5A7 615 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 KSR2Q6VAB6 950 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 MIER3Q7Z3K6 550 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 SLC7A5P2Q9GIP4 190 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 ADGRF5Q8IZF2 1346 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 PLEKHG3A1L390 1219 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 HERC4Q5GLZ8 1057 aaPredicted RBP14.91□□□□□ -0.02
LMBR1-201ENST00000353442 C2CD5Q86YS7 1000 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 ANAPC5Q9UJX4 755 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 TYW5A2RUC4 315 aaKnown RBP14.91□□□□□ -0.02
LMBR1-201ENST00000353442 PPP4R1Q8TF05 950 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 KIAA1107Q9UPP5 1409 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 SMIM24O75264 130 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 ADCY7P51828 1080 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 SUFUQ9UMX1 484 aa14.91□□□□□ -0.02
LMBR1-201ENST00000353442 KRT15P19012 456 aa14.9□□□□□ -0.02
LMBR1-201ENST00000353442 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
LMBR1-201ENST00000353442 POLKQ9UBT6 870 aa14.9□□□□□ -0.02
LMBR1-201ENST00000353442 TTF2Q9UNY4 1162 aaKnown RBP14.9□□□□□ -0.02
LMBR1-201ENST00000353442 SDSP20132 328 aa14.9□□□□□ -0.02
LMBR1-201ENST00000353442 TBC1D8BQ0IIM8 1120 aa14.9□□□□□ -0.02
LMBR1-201ENST00000353442 AP5M1Q9H0R1 490 aa14.9□□□□□ -0.02
LMBR1-201ENST00000353442 I3L4J1 428 aa14.9□□□□□ -0.02
LMBR1-201ENST00000353442 LIG4P49917 911 aa14.9□□□□□ -0.02
LMBR1-201ENST00000353442 TIMM10P62072 90 aa14.9□□□□□ -0.02
LMBR1-201ENST00000353442 S100BP04271 92 aaPredicted RBP14.9□□□□□ -0.02
LMBR1-201ENST00000353442 VAV2P52735 878 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms