RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ZRANB2O95218 330 aaKnown RBP eCLIP28.06■■■□□ 2.081e-6■■□□□ 12.9
CPNE1-202ENST00000352393 TDO2P48775 406 aa28.06■■■□□ 2.08
CPNE1-202ENST00000352393 RRP12Q5JTH9 1297 aaKnown RBP28.06■■■□□ 2.08
CPNE1-202ENST00000352393 ZNF34Q8IZ26 560 aa28.06■■■□□ 2.08
CPNE1-202ENST00000352393 ST7Q9NRC1 585 aa28.06■■■□□ 2.08
CPNE1-202ENST00000352393 PNMA6AP0CW24 399 aaPredicted RBP28.05■■■□□ 2.08
CPNE1-202ENST00000352393 TRMT44Q8IYL2 757 aaKnown RBP28.05■■■□□ 2.08
CPNE1-202ENST00000352393 GRAMD1CQ8IYS0 662 aa28.05■■■□□ 2.08
CPNE1-202ENST00000352393 AK7Q96M32 723 aa28.05■■■□□ 2.08
CPNE1-202ENST00000352393 CARD6Q9BX69 1037 aa28.05■■■□□ 2.08
CPNE1-202ENST00000352393 NACAP1Q9BZK3 213 aa28.05■■■□□ 2.08
CPNE1-202ENST00000352393 CCDC196A0A1B0GTZ2 297 aa28.04■■■□□ 2.08
CPNE1-202ENST00000352393 KANK3Q6NY19 840 aa28.04■■■□□ 2.08
CPNE1-202ENST00000352393 NUTM2AQ8IVF1 878 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-202ENST00000352393 ARGLU1Q9NWB6 273 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-202ENST00000352393 CEP131Q9UPN4 1083 aa28.04■■■□□ 2.08
CPNE1-202ENST00000352393 SLC4A4Q9Y6R1 1079 aa28.04■■■□□ 2.08
CPNE1-202ENST00000352393 PLCD1P51178 756 aa28.04■■■□□ 2.08
CPNE1-202ENST00000352393 FAM193AP78312 1265 aa28.04■■■□□ 2.08
CPNE1-202ENST00000352393 OXER1Q8TDS5 423 aa28.04■■■□□ 2.08
CPNE1-202ENST00000352393 TOGARAM2Q6ZUX3 1019 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 ZNF654Q8IZM8 581 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 TMTC2Q8N394 836 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 SEC31BQ9NQW1 1179 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 RAI14Q9P0K7 980 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 ERICH2A1L162 156 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 SNAP23O00161 211 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 CDK11BP21127 795 aaKnown RBP28.03■■■□□ 2.08
CPNE1-202ENST00000352393 DZIP3Q86Y13 1208 aaKnown RBP28.03■■■□□ 2.08
CPNE1-202ENST00000352393 PDILTQ8N807 584 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 FANCBQ8NB91 859 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 WDR24Q96S15 920 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 TOMM22Q9NS69 142 aa28.03■■■□□ 2.08
CPNE1-202ENST00000352393 ERCC5P28715 1186 aaPredicted RBP28.02■■■□□ 2.08
CPNE1-202ENST00000352393 CREBRFQ8IUR6 639 aa28.02■■■□□ 2.08
CPNE1-202ENST00000352393 CMTR1Q8N1G2 835 aaKnown RBP28.02■■■□□ 2.08
CPNE1-202ENST00000352393 CSRNP2Q9H175 543 aa28.02■■■□□ 2.08
CPNE1-202ENST00000352393 PHLPP1O60346 1717 aa28.01■■■□□ 2.08
CPNE1-202ENST00000352393 STRCQ7RTU9 1775 aa28.01■■■□□ 2.08
CPNE1-202ENST00000352393 TPM1P09493 284 aa28.01■■■□□ 2.08
CPNE1-202ENST00000352393 ADKP55263 362 aaKnown RBP28.01■■■□□ 2.08
CPNE1-202ENST00000352393 USP49Q70CQ1 688 aa28.01■■■□□ 2.08
CPNE1-202ENST00000352393 RNF41Q9H4P4 317 aaPredicted RBP28.01■■■□□ 2.08
CPNE1-202ENST00000352393 SAMSN1Q9NSI8 373 aaKnown RBP28.01■■■□□ 2.08
CPNE1-202ENST00000352393 SLAIN2Q9P270 581 aa28.01■■■□□ 2.08
CPNE1-202ENST00000352393 DISP2A7MBM2 1401 aa28.01■■■□□ 2.07
CPNE1-202ENST00000352393 A0A1B0GTH6 734 aa28.01■■■□□ 2.07
CPNE1-202ENST00000352393 IL6STP40189 918 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-202ENST00000352393 MAP3K9P80192 1104 aa28.01■■■□□ 2.07
CPNE1-202ENST00000352393 NR1I3Q14994 352 aa28.01■■■□□ 2.07
CPNE1-202ENST00000352393 TMCO3Q6UWJ1 677 aa28.01■■■□□ 2.07
CPNE1-202ENST00000352393 CCDC82Q8N4S0 544 aa28.01■■■□□ 2.07
CPNE1-202ENST00000352393 KIFC2Q96AC6 838 aa28.01■■■□□ 2.07
CPNE1-202ENST00000352393 CASQ1P31415 396 aa28■■■□□ 2.07
CPNE1-202ENST00000352393 SHISA4Q96DD7 197 aa28■■■□□ 2.07
CPNE1-202ENST00000352393 LAMB2P55268 1798 aa28■■■□□ 2.07
CPNE1-202ENST00000352393 MYH2Q9UKX2 1941 aa28■■■□□ 2.07
CPNE1-202ENST00000352393 PLA2G4AP47712 749 aa28■■■□□ 2.07
CPNE1-202ENST00000352393 GNG11P61952 73 aa28■■■□□ 2.07
CPNE1-202ENST00000352393 RNF26Q9BY78 433 aaPredicted RBP28■■■□□ 2.07
CPNE1-202ENST00000352393 AATFQ9NY61 560 aaKnown RBP eCLIP28■■■□□ 2.07
CPNE1-202ENST00000352393 MRFAP1Q9Y605 127 aa28■■■□□ 2.07
CPNE1-202ENST00000352393 FAM177A1Q8N128 213 aaPredicted RBP27.99■■■□□ 2.07
CPNE1-202ENST00000352393 RTL9Q8NET4 1388 aa27.99■■■□□ 2.07
CPNE1-202ENST00000352393 PPARAQ07869 468 aa27.98■■■□□ 2.07
CPNE1-202ENST00000352393 SEC23AQ15436 765 aa27.98■■■□□ 2.07
CPNE1-202ENST00000352393 CT47A1Q5JQC4 288 aaPredicted RBP27.98■■■□□ 2.07
CPNE1-202ENST00000352393 APTXQ7Z2E3 356 aaKnown RBP27.98■■■□□ 2.07
CPNE1-202ENST00000352393 NUP133Q8WUM0 1156 aa27.98■■■□□ 2.07
CPNE1-202ENST00000352393 CABP5Q9NP86 173 aa27.98■■■□□ 2.07
CPNE1-202ENST00000352393 BCL9LQ86UU0 1499 aa27.98■■■□□ 2.07
CPNE1-202ENST00000352393 DLEC1Q9Y238 1755 aa27.98■■■□□ 2.07
CPNE1-202ENST00000352393 DUOX1Q9NRD9 1551 aa27.97■■■□□ 2.07
CPNE1-202ENST00000352393 UBAC1Q9BSL1 405 aa27.97■■■□□ 2.07
CPNE1-202ENST00000352393 A0A087X0B3 334 aa27.97■■■□□ 2.07
CPNE1-202ENST00000352393 BCAMP50895 628 aa27.97■■■□□ 2.07
CPNE1-202ENST00000352393 TAF3Q5VWG9 929 aa27.97■■■□□ 2.07
CPNE1-202ENST00000352393 SH3RF1Q7Z6J0 888 aa27.97■■■□□ 2.07
CPNE1-202ENST00000352393 MIGA1Q8NAN2 632 aa27.97■■■□□ 2.07
CPNE1-202ENST00000352393 PANX2Q96RD6 677 aa27.97■■■□□ 2.07
CPNE1-202ENST00000352393 CICQ96RK0 1608 aaPredicted RBP27.96■■■□□ 2.07
CPNE1-202ENST00000352393 FAM205CA6NFA0 338 aa27.96■■■□□ 2.07
CPNE1-202ENST00000352393 ATP2B1P20020 1258 aa27.96■■■□□ 2.07
CPNE1-202ENST00000352393 RSRC2Q7L4I2 434 aaKnown RBP27.96■■■□□ 2.07
CPNE1-202ENST00000352393 TNKSO95271 1327 aa27.96■■■□□ 2.07
CPNE1-202ENST00000352393 TRIM75PA6NK02 468 aa27.95■■■□□ 2.07
CPNE1-202ENST00000352393 PPP2R3AQ06190 1150 aa27.95■■■□□ 2.07
CPNE1-202ENST00000352393 PPP2R5BQ15173 497 aa27.95■■■□□ 2.07
CPNE1-202ENST00000352393 SUSD4Q5VX71 490 aa27.95■■■□□ 2.07
CPNE1-202ENST00000352393 ANAPC4Q9UJX5 808 aa27.95■■■□□ 2.07
CPNE1-202ENST00000352393 ATP8B1O43520 1251 aa27.95■■■□□ 2.06
CPNE1-202ENST00000352393 CUL4BQ13620 913 aa27.95■■■□□ 2.06
CPNE1-202ENST00000352393 DHX58Q96C10 678 aa27.95■■■□□ 2.06
CPNE1-202ENST00000352393 DESI2Q9BSY9 194 aa27.95■■■□□ 2.06
CPNE1-202ENST00000352393 SYNRGQ9UMZ2 1314 aa27.94■■■□□ 2.06
CPNE1-202ENST00000352393 AKR1B15C9JRZ8 316 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-202ENST00000352393 PKN1Q16512 942 aa27.94■■■□□ 2.06
CPNE1-202ENST00000352393 SPATA1Q5VX52 437 aa27.94■■■□□ 2.06
CPNE1-202ENST00000352393 GPR161Q8N6U8 529 aaKnown RBP27.94■■■□□ 2.06
CPNE1-202ENST00000352393 PHF20Q9BVI0 1012 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms