RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TCP11L1Q9NUJ3 509 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 RBM28Q9NW13 759 aaKnown RBP8.04□□□□□ -1.12
TRIM55-203ENST00000350034 MCM9Q9NXL9 1143 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 SNED1Q8TER0 1413 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 WDR90Q96KV7 1748 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 MYH13Q9UKX3 1938 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 UBE2Q2LH0YL09 131 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 PRPF3O43395 683 aaKnown RBP8.03□□□□□ -1.12
TRIM55-203ENST00000350034 DEXIO95424 95 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 GUCY1A2P33402 732 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 USP5P45974 858 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 FKBP1AP62942 108 aaKnown RBP8.03□□□□□ -1.12
TRIM55-203ENST00000350034 GTF2IP78347 998 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 CCDC173Q0VFZ6 552 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 PKN1Q16512 942 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 UVSSAQ2YD98 709 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 CCDC178Q5BJE1 867 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 IFIT1BQ5T764 474 aaKnown RBP8.03□□□□□ -1.12
TRIM55-203ENST00000350034 MSL1Q68DK7 614 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 OLFM4Q6UX06 510 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 DPP8Q6V1X1 898 aaPredicted RBP8.03□□□□□ -1.12
TRIM55-203ENST00000350034 CATIPQ7Z7H3 387 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 DGKHQ86XP1 1220 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 C2CD5Q86YS7 1000 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 CERS5Q8N5B7 392 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 ENGASEQ8NFI3 743 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 TGFBRAP1Q8WUH2 860 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 CNKSR2Q8WXI2 1034 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 PDLIM2Q96JY6 352 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 EYA3Q99504 573 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 MAP3K14Q99558 947 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 NOL10Q9BSC4 688 aaKnown RBP8.03□□□□□ -1.12
TRIM55-203ENST00000350034 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRIM55-203ENST00000350034 MRIQ9BWK5 157 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 SLC26A6Q9BXS9 759 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 ZC3H12CQ9C0D7 883 aaKnown RBP8.03□□□□□ -1.12
TRIM55-203ENST00000350034 NUP62CLQ9H1M0 184 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 STK32BQ9NY57 414 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 DACT1Q9NYF0 836 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 DAGLAQ9Y4D2 1042 aa8.03□□□□□ -1.12
TRIM55-203ENST00000350034 COL11A2P13942 1736 aaPredicted RBP8.03□□□□□ -1.12
TRIM55-203ENST00000350034 LAMB1P07942 1786 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 GOLGA6L4A6NEF3 574 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 NR1I2O75469 434 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 MMP1P03956 469 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 POLR3DP05423 398 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-203ENST00000350034 NOVP48745 357 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 PLCD1P51178 756 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 SNW1Q13573 536 aaKnown RBP8.02□□□□□ -1.13
TRIM55-203ENST00000350034 SLC39A14Q15043 492 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 PTPAQ15257 358 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 FAM47AQ5JRC9 791 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 AXDND1Q5T1B0 1012 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-203ENST00000350034 ANO1Q5XXA6 986 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 ADALQ6DHV7 355 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 C16orf86Q6ZW13 317 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 TMTC3Q6ZXV5 915 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 TEX11Q8IYF3 940 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 KCNG4Q8TDN1 519 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 NUP133Q8WUM0 1156 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 SHISA4Q96DD7 197 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 DYNLL2Q96FJ2 89 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 FOXP1Q9H334 677 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-203ENST00000350034 GOLPH3LQ9H4A5 285 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 IL17RBQ9NRM6 502 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 PCDHA7Q9UN72 937 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 CLIC4Q9Y696 253 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 MORC2Q9Y6X9 1032 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-203ENST00000350034 QSER1Q2KHR3 1735 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 CCDC88AQ3V6T2 1871 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 DLEC1Q9Y238 1755 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 FLT1P17948 1338 aa8.02□□□□□ -1.13
TRIM55-203ENST00000350034 DDX60LQ5H9U9 1706 aaKnown RBP8.01□□□□□ -1.13
TRIM55-203ENST00000350034 FAM237AA0A1B0GTK4 181 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 TSPY2A6NKD2 308 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 H0YIN7 160 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 RIMBP2O15034 1052 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 SPTLC2O15270 562 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 NMT2O60551 498 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 PPP6R2O75170 966 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 PLEKHA8P1O95397 391 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 RASA1P20936 1047 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 TFAP4Q01664 338 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 CEBPZQ03701 1054 aaKnown RBP8.01□□□□□ -1.13
TRIM55-203ENST00000350034 GABPAQ06546 454 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 TRIM29Q14134 588 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 MAP3K11Q16584 847 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 CC2D2BQ6DHV5 1058 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 HHIPL2Q6UWX4 724 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 PODNQ7Z5L7 613 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 MAPKAPK5Q8IW41 473 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 CCAR1Q8IX12 1150 aaKnown RBP8.01□□□□□ -1.13
TRIM55-203ENST00000350034 AMOTL1Q8IY63 956 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 NEDD1Q8NHV4 660 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 BICD2Q8TD16 824 aa8.01□□□□□ -1.13
TRIM55-203ENST00000350034 ZNF622Q969S3 477 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRIM55-203ENST00000350034 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.01□□□□□ -1.13
TRIM55-203ENST00000350034 BAZ2AQ9UIF9 1905 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms